Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing pyrE gene

Properties
Regulator type: RNA regulatory element
Name: PyrR
RFAM: RF00515
Regulation mode:
Biological process: Pyrimidine metabolism
Effector: PyrR
Phylum: Firmicutes
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Lactobacillus acidophilus NCFM
Position: -118
Score: 23.15
Sequence: CAAACTTTAAACGGT...
Locus tag: LBA1386
Name: pyrF
Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
Locus tag: LBA1387
Name: pyrE
Funciton: Orotate phosphoribosyltransferase (EC 2.4.2.10)
pyrF-pyrE -118 23.1 CAAACTTTAAACGGT... LBA1386
Lactobacillus brevis ATCC 367
Position: -129
Score: 46.31
Sequence: ATCAAACTTTAATTT...
Locus tag: LVIS_2229
Name: pyrF
Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
Locus tag: LVIS_2228
Name: pyrE
Funciton: Orotate phosphoribosyltransferase (EC 2.4.2.10)
pyrF-pyrE -129 46.3 ATCAAACTTTAATTT... LVIS_2229
Lactobacillus casei ATCC 334
Position: -325
Score: 56.83
Sequence: AAGCACCTTTAACTA...
Locus tag: LSEI_1457
Name: pyrR
Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
Locus tag: LSEI_1456
Name: pyrP
Funciton: Xanthine/uracil permease
Locus tag: LSEI_1455
Name: pyrB
Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2)
Locus tag: LSEI_1454
Name: pyrC
Funciton: Dihydroorotase (EC 3.5.2.3)
Locus tag: LSEI_1453
Name: carA
Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Locus tag: LSEI_1452
Name: carB
Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Locus tag: LSEI_1451
Name: pyrD
Funciton: Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)
Locus tag: LSEI_1450
Name: pyrF
Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
Locus tag: LSEI_1449
Name: pyrE
Funciton: Orotate phosphoribosyltransferase (EC 2.4.2.10)
pyrR-pyrP-pyrB-pyrC-carA-carB-pyrD-pyrF-pyrE -325 56.8 AAGCACCTTTAACTA... LSEI_1457
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
Position: -140
Score: 19.19
Sequence: TGAGCTTTAATTGGT...
Locus tag: LBUL_1422
Name: pyrF
Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
Locus tag: LBUL_1423
Name: pyrE
Funciton: Orotate phosphoribosyltransferase (EC 2.4.2.10)
pyrF-pyrE -140 19.2 TGAGCTTTAATTGGT... LBUL_1422
Lactobacillus fermentum IFO 3956
Position: -116
Score: 45.39
Sequence: TCACCATTTAAGTAA...
Locus tag: LAF_0047
Name: pyrF
Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
Locus tag: LAF_0048
Name: pyrE
Funciton: Orotate phosphoribosyltransferase (EC 2.4.2.10)
pyrF-pyrE -116 45.4 TCACCATTTAAGTAA... LAF_0047
Lactobacillus helveticus DPC 4571
Position: -118
Score: 26.31
Sequence: CAAACTTTAAACGGT...
Locus tag: lhv_2938
Name: pyrF
Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
Locus tag: lhv_1451
Name: pyrE
Funciton: Orotate phosphoribosyltransferase (EC 2.4.2.10)
pyrF-pyrE -118 26.3 CAAACTTTAAACGGT... lhv_2938
Lactobacillus johnsonii NCC 533
Position: -115
Score: 25.78
Sequence: TAAACTTTAAACGGT...
Locus tag: LJ1282
Name: pyrF
Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
Locus tag: LJ1283
Name: pyrE
Funciton: Orotate phosphoribosyltransferase (EC 2.4.2.10)
pyrF-pyrE -115 25.8 TAAACTTTAAACGGT... LJ1282
Lactobacillus plantarum WCFS1
Position: -136
Score: 42.7
Sequence: TAAAACCATTTAATT...
Locus tag: lp_2703
Name: pyrB
Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2)
Locus tag: lp_2702
Name: pyrC
Funciton: Dihydroorotase (EC 3.5.2.3)
Locus tag: lp_2701
Name: carA
Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Locus tag: lp_2700
Name: carB
Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Locus tag: lp_2699
Name: pyrD
Funciton: Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)
Locus tag: lp_2698
Name: pyrF
Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
Locus tag: lp_2697
Name: pyrE
Funciton: Orotate phosphoribosyltransferase (EC 2.4.2.10)
pyrB-pyrC-carA-carB-pyrD-pyrF-pyrE -136 42.7 TAAAACCATTTAATT... lp_2703
Lactobacillus reuteri JCM 1112
Position: -292
Score: 59.56
Sequence: ATACCTTTAACTTAG...
Position: -148
Score: 40.0
Sequence: CGACCATTTAATTGT...
Locus tag: LAR_0117
Name: pyrB
Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2)
Locus tag: LAR_0118
Name: pyrC
Funciton: Dihydroorotase (EC 3.5.2.3)
Locus tag: LAR_0119
Name: pyrD
Funciton: Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)
Locus tag: LAR_0120
Name: pyrF
Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
Locus tag: LAR_0121
Name: pyrE
Funciton: Orotate phosphoribosyltransferase (EC 2.4.2.10)
pyrB-pyrC-pyrD-pyrF-pyrE -292 59.6 ATACCTTTAACTTAG... LAR_0117
-148 40 CGACCATTTAATTGT...
Lactobacillus rhamnosus GG
Position: -466
Score: 60.16
Sequence: AAGCACCTTTAACTA...
Locus tag: LGG_01461
Name: pyrR
Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
Locus tag: LGG_01460
Name: pyrP
Funciton: Xanthine/uracil permease
Locus tag: LGG_01459
Name: pyrB
Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2)
Locus tag: LGG_01458
Name: pyrC
Funciton: Dihydroorotase (EC 3.5.2.3)
Locus tag: LGG_01457
Name: carA
Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Locus tag: LGG_01456
Name: carB
Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Locus tag: LGG_01455
Name: pyrD
Funciton: Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)
Locus tag: LGG_01454
Name: pyrF
Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
Locus tag: LGG_01453
Name: pyrE
Funciton: Orotate phosphoribosyltransferase (EC 2.4.2.10)
pyrR-pyrP-pyrB-pyrC-carA-carB-pyrD-pyrF-pyrE -466 60.2 AAGCACCTTTAACTA... LGG_01461
Lactobacillus sakei subsp. sakei 23K
Position: -169
Score: 41.02
Sequence: GAACCGTTTAATTGT...
Locus tag: LSA0951
Name: pyrP
Funciton: Xanthine/uracil permease
Locus tag: LSA0952
Name: pyrB
Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2)
Locus tag: LSA0953
Name: pyrC
Funciton: Dihydroorotase (EC 3.5.2.3)
Locus tag: LSA0954
Name: carA
Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Locus tag: LSA0955
Name: carB
Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Locus tag: LSA0956
Name: pyrK
Funciton: Dihydroorotate oxidase, electron transfer subunit
Locus tag: LSA0957
Name: pyrD
Funciton: Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)
Locus tag: LSA0958
Name: pyrF
Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
Locus tag: LSA0959
Name: pyrE
Funciton: Orotate phosphoribosyltransferase (EC 2.4.2.10)
pyrP-pyrB-pyrC-carA-carB-pyrK-pyrD-pyrF-pyrE -169 41 GAACCGTTTAATTGT... LSA0951
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
Position: -133
Score: 60.37
Sequence: TAAAACCTTTAATCA...
Locus tag: LEUM_1210
Name: pyrB
Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2)
Locus tag: LEUM_1209
Name: pyrC
Funciton: Dihydroorotase (EC 3.5.2.3)
Locus tag: LEUM_1208
Name: carA
Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Locus tag: LEUM_1207
Name: carB
Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Locus tag: LEUM_1206
Name: pyrF
Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
Locus tag: LEUM_1205
Name: pyrE
Funciton: Orotate phosphoribosyltransferase (EC 2.4.2.10)
pyrB-pyrC-carA-carB-pyrF-pyrE -133 60.4 TAAAACCTTTAATCA... LEUM_1210
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