Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing pyrP gene

Properties
Regulator type: RNA regulatory element
Name: PyrR
RFAM: RF00515
Regulation mode:
Biological process: Pyrimidine metabolism
Effector: PyrR
Phylum: Firmicutes
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Lactobacillus acidophilus NCFM
Position: -147
Score: 63.05
Sequence: GATGACCTTTAAAAT...
Locus tag: LBA0563
Name: pyrR
Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
Locus tag: LBA0562
Name: pyrP
Funciton: Xanthine/uracil permease
pyrR-pyrP -147 63 GATGACCTTTAAAAT... LBA0563
Lactobacillus brevis ATCC 367
Position: -128
Score: 47.31
Sequence: ATAGTCCTTTAATAT...
Locus tag: LVIS_1729
Name: pyrP
Funciton: Xanthine/uracil permease
pyrP -128 47.3 ATAGTCCTTTAATAT... LVIS_1729
Lactobacillus casei ATCC 334
Position: -325
Score: 56.83
Sequence: AAGCACCTTTAACTA...
Locus tag: LSEI_1457
Name: pyrR
Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
Locus tag: LSEI_1456
Name: pyrP
Funciton: Xanthine/uracil permease
Locus tag: LSEI_1455
Name: pyrB
Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2)
Locus tag: LSEI_1454
Name: pyrC
Funciton: Dihydroorotase (EC 3.5.2.3)
Locus tag: LSEI_1453
Name: carA
Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Locus tag: LSEI_1452
Name: carB
Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Locus tag: LSEI_1451
Name: pyrD
Funciton: Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)
Locus tag: LSEI_1450
Name: pyrF
Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
Locus tag: LSEI_1449
Name: pyrE
Funciton: Orotate phosphoribosyltransferase (EC 2.4.2.10)
pyrR-pyrP-pyrB-pyrC-carA-carB-pyrD-pyrF-pyrE -325 56.8 AAGCACCTTTAACTA... LSEI_1457
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
Position: -79
Score: 41.01
Sequence: GAACCTTTAAATTCA...
Locus tag: LBUL_0487
Name: pyrP
Funciton: Xanthine/uracil permease
pyrP -79 41 GAACCTTTAAATTCA... LBUL_0487
Lactobacillus fermentum IFO 3956
Position: -115
Score: 43.34
Sequence: AGTCCTTTAATGGAA...
Locus tag: LAF_0434
Name: pyrP
Funciton: Xanthine/uracil permease
pyrP -115 43.3 AGTCCTTTAATGGAA... LAF_0434
Lactobacillus helveticus DPC 4571
Position: -142
Score: 56.73
Sequence: GATGCCCTTTAAAGT...
Locus tag: lhv_0582
Name: pyrR
Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
Locus tag: lhv_0581
Name: pyrP
Funciton: Xanthine/uracil permease
pyrR-pyrP -142 56.7 GATGCCCTTTAAAGT... lhv_0582
Lactobacillus johnsonii NCC 533
Position: -158
Score: 55.64
Sequence: GATGACCTTTAATAT...
Locus tag: LJ0709
Name: pyrP
Funciton: Xanthine/uracil permease
pyrP -158 55.6 GATGACCTTTAATAT... LJ0709
Lactobacillus plantarum WCFS1
Position: -146
Score: 59.79
Sequence: CAGTTCCTTTAAATT...
Locus tag: lp_2371
Name: pyrP
Funciton: Xanthine/uracil permease
pyrP -146 59.8 CAGTTCCTTTAAATT... lp_2371
Lactobacillus reuteri JCM 1112
Position: -94
Score: 57.8
Sequence: AGACCTTTAATCGGA...
Locus tag: LAR_0450
Name: pyrP
Funciton: Xanthine/uracil permease
pyrP -94 57.8 AGACCTTTAATCGGA... LAR_0450
Lactobacillus rhamnosus GG
Position: -466
Score: 60.16
Sequence: AAGCACCTTTAACTA...
Locus tag: LGG_01461
Name: pyrR
Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
Locus tag: LGG_01460
Name: pyrP
Funciton: Xanthine/uracil permease
Locus tag: LGG_01459
Name: pyrB
Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2)
Locus tag: LGG_01458
Name: pyrC
Funciton: Dihydroorotase (EC 3.5.2.3)
Locus tag: LGG_01457
Name: carA
Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Locus tag: LGG_01456
Name: carB
Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Locus tag: LGG_01455
Name: pyrD
Funciton: Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)
Locus tag: LGG_01454
Name: pyrF
Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
Locus tag: LGG_01453
Name: pyrE
Funciton: Orotate phosphoribosyltransferase (EC 2.4.2.10)
pyrR-pyrP-pyrB-pyrC-carA-carB-pyrD-pyrF-pyrE -466 60.2 AAGCACCTTTAACTA... LGG_01461
Lactobacillus sakei subsp. sakei 23K
Position: -169
Score: 41.02
Sequence: GAACCGTTTAATTGT...
Locus tag: LSA0951
Name: pyrP
Funciton: Xanthine/uracil permease
Locus tag: LSA0952
Name: pyrB
Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2)
Locus tag: LSA0953
Name: pyrC
Funciton: Dihydroorotase (EC 3.5.2.3)
Locus tag: LSA0954
Name: carA
Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Locus tag: LSA0955
Name: carB
Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Locus tag: LSA0956
Name: pyrK
Funciton: Dihydroorotate oxidase, electron transfer subunit
Locus tag: LSA0957
Name: pyrD
Funciton: Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)
Locus tag: LSA0958
Name: pyrF
Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
Locus tag: LSA0959
Name: pyrE
Funciton: Orotate phosphoribosyltransferase (EC 2.4.2.10)
pyrP-pyrB-pyrC-carA-carB-pyrK-pyrD-pyrF-pyrE -169 41 GAACCGTTTAATTGT... LSA0951
Lactobacillus salivarius subsp. salivarius UCC118
Position: -176
Score: 39.38
Sequence: AGTCCTTTAAACTAG...
Locus tag: LSL_0827
Name: pyrR
Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
Locus tag: LSL_0828
Name: pyrP
Funciton: Xanthine/uracil permease
Locus tag: LSL_0829
Name: carA
Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
pyrR-pyrP-carA -176 39.4 AGTCCTTTAAACTAG... LSL_0827
Pediococcus pentosaceus ATCC 25745
Position: -145
Score: 45.77
Sequence: AGAAACCTTAATTTG...
Locus tag: PEPE_1124
Name: pyrP
Funciton: Xanthine/uracil permease
pyrP -145 45.8 AGAAACCTTAATTTG... PEPE_1124
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