Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rhiL gene

Properties
Regulog: CcpA - Bacillales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode:
Biological process: Carbon catabolism
Effector: HPr, phosphocarrier protein
Phylum: Firmicutes
Built upon 559 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bacillus halodurans C-125
Position: -33
Score: 4.85316
Sequence: ATGTAAGCACTTTCAA
Locus tag: BH1117
Name: rhiL
Funciton: Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein
Locus tag: BH1118
Name: rhiF
Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 1
Locus tag: BH1119
Name: rhiG
Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 2
Locus tag: BH1120
Name: rhiN1
Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
Locus tag: BH1121
Name: yesV
Funciton: Putative integral inner membrane component
rhiL-rhiF-rhiG-rhiN1-yesV -33 4.9 ATGTAAGCACTTTCAA BH1117
Bacillus licheniformis DSM 13
Position: -37
Score: 4.46205
Sequence: GAGTAAGCGTTTACAA
Position: -30
Score: 4.79269
Sequence: ATGTAAGCACTTACAA
Locus tag: BLi01368
Name: rhiL
Funciton: Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein
Locus tag: BLi01369
Name: rhiF
Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 1
Locus tag: BLi01370
Name: rhiG
Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 2
Locus tag: BLi01371
Name: rhiN1
Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
Locus tag: BLi01372
Name: rhgR
Funciton: Transcriptional regulator of rhamnogalacturonan utilization, AraC family
Locus tag: BLi01373
Name: yesT
Funciton: Rhamnogalacturonan acetylesterase
Locus tag: BLi01374
Name: yesU
Funciton: Hypothetical protein
Locus tag: BLi01375
Name: yesV
Funciton: Putative integral inner membrane component
Locus tag: BLi01376
Name: yesW
Funciton: Predicted rhamnogalacturonan lyase in rhamnose utilization cluster
Locus tag: BLi01377
Name: BLi01377
Funciton: Hypothetical protein
Locus tag: BLi01378
Name: yesT
Funciton: Rhamnogalacturonan acetylesterase
Locus tag: BLi01379
Name: yesX
Funciton: Predicted rhamnogalacturonan lyase in rhamnose utilization cluster
Locus tag: BLi01380
Name: yghZ
Funciton: Putative ion-channel protein
Locus tag: BLi01381
Name: yesY
Funciton: Possible rhamnogalacturan acetylesterase
Locus tag: BLi01382
Name: yesZ
Funciton: Beta-galactosidase (EC 3.2.1.23)
rhiL-rhiF-rhiG-rhiN1-rhgR-yesT-yesU-yesV-yesW-BLi01377-yesT-yesX-yghZ-yesY-yesZ -37 4.5 GAGTAAGCGTTTACAA BLi01368
-30 4.8 ATGTAAGCACTTACAA
Bacillus subtilis subsp. subtilis str. 168
Position: -32
Score: 4.76486
Sequence: ATGTAAGCACTTACAT
Position: -20
Score: 4.59725
Sequence: AAGTAAGCGCTTACAG
Locus tag: BSU06970
Name: rhiL
Funciton: Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein
Locus tag: BSU06980
Name: rhiF
Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 1
Locus tag: BSU06990
Name: rhiG
Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 2
Locus tag: BSU07000
Name: rhiN1
Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
Locus tag: BSU07010
Name: rhgR
Funciton: Transcriptional regulator of rhamnogalacturonan utilization, AraC family
Locus tag: BSU07020
Name: yesT
Funciton: Rhamnogalacturonan acetylesterase
Locus tag: BSU07030
Name: yesU
Funciton: Hypothetical protein
Locus tag: BSU07040
Name: yesV
Funciton: Putative integral inner membrane component
Locus tag: BSU07050
Name: yesW
Funciton: Predicted rhamnogalacturonan lyase in rhamnose utilization cluster
Locus tag: BSU07060
Name: yesX
Funciton: Predicted rhamnogalacturonan lyase in rhamnose utilization cluster
Locus tag: BSU07070
Name: yesY
Funciton: Possible rhamnogalacturan acetylesterase
Locus tag: BSU07080
Name: yesZ
Funciton: Beta-galactosidase (EC 3.2.1.23)
rhiL-rhiF-rhiG-rhiN1-rhgR-yesT-yesU-yesV-yesW-yesX-yesY-yesZ -32 4.8 ATGTAAGCACTTACAT BSU06970
-20 4.6 AAGTAAGCGCTTACAG
Paenibacillus sp. JDR-2
Position: -41
Score: 4.64634
Sequence: ATGTAAACACTTACAT
Locus tag: Pjdr2_3535
Name: rhiL
Funciton: Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein
Locus tag: Pjdr2_3534
Name: rhiF
Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 1
Locus tag: Pjdr2_3533
Name: rhiG
Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 2
rhiL-rhiF-rhiG -41 4.6 ATGTAAACACTTACAT Pjdr2_3535