Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing trpA gene

Properties
Regulator type: RNA regulatory element
Name: Trp_leader
RFAM: RF00513
Regulation mode:
Biological process: Tryptophan biosynthesis
Effector:
Phylum: Proteobacteria
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -149
Score: 35.05
Sequence: ACTGGTGGTGGCACT...
Locus tag: Sama_2129
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: Sama_2130
Name: trpG
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: Sama_2131
Name: trpD
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: Sama_2132
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: Sama_2133
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: Sama_2134
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE-trpG-trpD-trpC-trpB-trpA -149 35 ACTGGTGGTGGCACT... Sama_2129
Shewanella baltica OS155
Position: -205
Score: 43.2
Sequence: TCATTTGGTGGTGGC...
Locus tag: Sbal_2701
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: Sbal_2702
Name: trpG
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: Sbal_2703
Name: trpD
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: Sbal_2704
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: Sbal_2705
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: Sbal_2706
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE-trpG-trpD-trpC-trpB-trpA -205 43.2 TCATTTGGTGGTGGC... Sbal_2701
Shewanella denitrificans OS217
Position: -182
Score: 45.89
Sequence: TTTCTTGGTGGTGGC...
Locus tag: Sden_2450
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: Sden_2451
Name: trpG
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: Sden_2452
Name: trpD
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: Sden_2453
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: Sden_2454
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: Sden_2455
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE-trpG-trpD-trpC-trpB-trpA -182 45.9 TTTCTTGGTGGTGGC... Sden_2450
Shewanella frigidimarina NCIMB 400
Position: -196
Score: 33.57
Sequence: ACATGGTGGTGGCAC...
Locus tag: Sfri_1429
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: Sfri_1428
Name: trpG
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: Sfri_1427
Name: trpD
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: Sfri_1426
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: Sfri_1425
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: Sfri_1424
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE-trpG-trpD-trpC-trpB-trpA -196 33.6 ACATGGTGGTGGCAC... Sfri_1429
Shewanella halifaxensis HAW-EB4
Position: -221
Score: 40.48
Sequence: CATCAATTGGTGGTG...
Locus tag: Shal_1658
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: Shal_1657
Name: trpG
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: Shal_1656
Name: trpD
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: Shal_1655
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: Shal_1654
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: Shal_1653
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE-trpG-trpD-trpC-trpB-trpA -221 40.5 CATCAATTGGTGGTG... Shal_1658
Shewanella loihica PV-4
Position: -200
Score: 34.5
Sequence: TCAACTGGTGGTGGC...
Locus tag: Shew_2251
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: Shew_2252
Name: trpG
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: Shew_2253
Name: trpD
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: Shew_2254
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: Shew_2255
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: Shew_2256
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE-trpG-trpD-trpC-trpB-trpA -200 34.5 TCAACTGGTGGTGGC... Shew_2251
Shewanella oneidensis MR-1
Position: -160
Score: 44.05
Sequence: TCATTTGGTGGTGGC...
Locus tag: SO_3019
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: SO_3020
Name: trpG
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: SO_3021
Name: trpD
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: SO_3022
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: SO_3023
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: SO_3024
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE-trpG-trpD-trpC-trpB-trpA -160 44 TCATTTGGTGGTGGC... SO_3019
Shewanella pealeana ATCC 700345
Position: -224
Score: 41.52
Sequence: CATTAATTGGTGGTG...
Locus tag: Spea_1590
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: Spea_1589
Name: trpG
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: Spea_1588
Name: trpD
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: Spea_1587
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: Spea_1586
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: Spea_1585
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE-trpG-trpD-trpC-trpB-trpA -224 41.5 CATTAATTGGTGGTG... Spea_1590
Shewanella piezotolerans WP3
Position: -231
Score: 45.03
Sequence: CATTAATTGGTGGTG...
Locus tag: swp_1923
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: swp_1922
Name: trpG
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: swp_1921
Name: trpD
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: swp_1920
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: swp_1919
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: swp_1918
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE-trpG-trpD-trpC-trpB-trpA -231 45 CATTAATTGGTGGTG... swp_1923
Shewanella putrefaciens CN-32
Position: -204
Score: 42.57
Sequence: TCATTTGGTGGTGGC...
Locus tag: Sputcn32_2403
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: Sputcn32_2404
Name: trpG
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: Sputcn32_2405
Name: trpD
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: Sputcn32_2406
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: Sputcn32_2407
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: Sputcn32_2408
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE-trpG-trpD-trpC-trpB-trpA -204 42.6 TCATTTGGTGGTGGC... Sputcn32_2403
Shewanella sediminis HAW-EB3
Position: -184
Score: 46.52
Sequence: CATTAATTGGTGGTG...
Locus tag: Ssed_1686
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: Ssed_1685
Name: trpG
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: Ssed_1684
Name: trpD
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: Ssed_1683
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: Ssed_1682
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: Ssed_1681
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE-trpG-trpD-trpC-trpB-trpA -184 46.5 CATTAATTGGTGGTG... Ssed_1686
Shewanella sp ANA-3
Position: -160
Score: 40.72
Sequence: CATCATTTGGTGGTG...
Locus tag: Shewana3_1520
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: Shewana3_1519
Name: trpG
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: Shewana3_1518
Name: trpD
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: Shewana3_1517
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: Shewana3_1516
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: Shewana3_1515
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE-trpG-trpD-trpC-trpB-trpA -160 40.7 CATCATTTGGTGGTG... Shewana3_1520
Shewanella sp MR-4
Position: -160
Score: 44.82
Sequence: CATCATTTGGTGGTG...
Locus tag: Shewmr4_1462
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: Shewmr4_1461
Name: trpG
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: Shewmr4_1460
Name: trpD
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: Shewmr4_1459
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: Shewmr4_1458
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: Shewmr4_1457
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE-trpG-trpD-trpC-trpB-trpA -160 44.8 CATCATTTGGTGGTG... Shewmr4_1462
Shewanella sp MR-7
Position: -160
Score: 44.82
Sequence: CATCATTTGGTGGTG...
Locus tag: Shewmr7_1528
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: Shewmr7_1527
Name: trpG
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: Shewmr7_1526
Name: trpD
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: Shewmr7_1525
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: Shewmr7_1524
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: Shewmr7_1523
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE-trpG-trpD-trpC-trpB-trpA -160 44.8 CATCATTTGGTGGTG... Shewmr7_1528
Shewanella sp W3-18-1
Position: -200
Score: 42.57
Sequence: CATCATTTGGTGGTG...
Locus tag: Sputw3181_1605
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: Sputw3181_1604
Name: trpG
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: Sputw3181_1603
Name: trpD
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: Sputw3181_1602
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: Sputw3181_1601
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: Sputw3181_1600
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE-trpG-trpD-trpC-trpB-trpA -200 42.6 CATCATTTGGTGGTG... Sputw3181_1605
Shewanella woodyi ATCC 51908
Position: -179
Score: 49.36
Sequence: TCAATTGGTGGTGGC...
Locus tag: Swoo_2912
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: Swoo_2913
Name: trpG
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: Swoo_2914
Name: trpD
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: Swoo_2915
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: Swoo_2916
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: Swoo_2917
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE-trpG-trpD-trpC-trpB-trpA -179 49.4 TCAATTGGTGGTGGC... Swoo_2912
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