Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ykkC gene

Properties
Regulator type: RNA regulatory element
Name: mini-ykkC
RFAM: RF01068
Regulation mode:
Biological process: Multidrug resistance
Effector:
Phylum: Proteobacteria
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella baltica OS155
Position: -65
Score: 46.12
Sequence: GGCTTAGGGACGACC...
Locus tag: Sbal_2825
Name: ykkC
Funciton: Quaternary ammonium compound-resistance protein sugE
ykkC -65 46.1 GGCTTAGGGACGACC... Sbal_2825
Shewanella oneidensis MR-1
Position: -62
Score: 43.77
Sequence: CTTAGGGACGACCCT...
Locus tag: SO_1901
Name: ykkC
Funciton: Quaternary ammonium compound-resistance protein sugE
ykkC -62 43.8 CTTAGGGACGACCCT... SO_1901
Shewanella putrefaciens CN-32
Position: -63
Score: 44.29
Sequence: CTTAGGGACGACCCT...
Locus tag: Sputcn32_1722
Name: ykkC
Funciton: Quaternary ammonium compound-resistance protein sugE
ykkC -63 44.3 CTTAGGGACGACCCT... Sputcn32_1722
Shewanella sp ANA-3
Position: -62
Score: 43.77
Sequence: CTTAGGGACGACCCT...
Locus tag: Shewana3_1676
Name: ykkC
Funciton: Quaternary ammonium compound-resistance protein sugE
ykkC -62 43.8 CTTAGGGACGACCCT... Shewana3_1676
Shewanella sp MR-4
Position: -62
Score: 43.77
Sequence: CTTAGGGACGACCCT...
Locus tag: Shewmr4_1608
Name: ykkC
Funciton: Quaternary ammonium compound-resistance protein sugE
ykkC -62 43.8 CTTAGGGACGACCCT... Shewmr4_1608
Shewanella sp MR-7
Position: -62
Score: 41.5
Sequence: CTTAGGGACGACCTT...
Locus tag: Shewmr7_1683
Name: ykkC
Funciton: Quaternary ammonium compound-resistance protein sugE
ykkC -62 41.5 CTTAGGGACGACCTT... Shewmr7_1683
Shewanella sp W3-18-1
Position: -65
Score: 44.29
Sequence: GGCTTAGGGACGACC...
Locus tag: Sputw3181_2303
Name: ykkC
Funciton: Quaternary ammonium compound-resistance protein sugE
ykkC -65 44.3 GGCTTAGGGACGACC... Sputw3181_2303
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