Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ykkD gene

Properties
Regulator type: RNA regulatory element
Name: ykkC-yxkD
RFAM: RF00442
Regulation mode:
Biological process: Multidrug resistance
Effector:
Phylum: Firmicutes
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bacillus amyloliquefaciens FZB42
Position: -174
Score: 90.77
Sequence: GACATGTTTTCTAGG...
Locus tag: RBAM_012900
Name: ykkC
Funciton: Quaternary ammonium compound-resistance protein sugE
Locus tag: RBAM_012910
Name: ykkD
Funciton: Quaternary ammonium compound-resistance protein sugE
ykkC-ykkD -174 90.8 GACATGTTTTCTAGG... RBAM_012900
Bacillus clausii KSM-K16
Position: -150
Score: 80.94
Sequence: GCACAAATGCGCCTA...
Locus tag: ABC3844
Name: ykkC
Funciton: Quaternary ammonium compound-resistance protein sugE
Locus tag: ABC3843
Name: ykkD
Funciton: Quaternary ammonium compound-resistance protein sugE
ykkC-ykkD -150 80.9 GCACAAATGCGCCTA... ABC3844
Bacillus halodurans C-125
Position: -155
Score: 94.79
Sequence: GCCAAATGTTTTCTA...
Locus tag: BH0686
Name: ykkC
Funciton: Quaternary ammonium compound-resistance protein sugE
Locus tag: BH0685
Name: ykkD
Funciton: Quaternary ammonium compound-resistance protein sugE
ykkC-ykkD -155 94.8 GCCAAATGTTTTCTA... BH0686
Bacillus licheniformis DSM 13
Position: -162
Score: 94.71
Sequence: TTAAAGTTTTCTAGG...
Locus tag: BLi01409
Name: ykkC
Funciton: Quaternary ammonium compound-resistance protein sugE
Locus tag: BLi01410
Name: ykkD
Funciton: Quaternary ammonium compound-resistance protein sugE
ykkC-ykkD -162 94.7 TTAAAGTTTTCTAGG... BLi01409
Bacillus pumilus SAFR-032
Position: -174
Score: 84.17
Sequence: AATTGGTTTTCTAGG...
Locus tag: BPUM_1202
Name: ykkC
Funciton: Quaternary ammonium compound-resistance protein sugE
Locus tag: BPUM_1203
Name: ykkD
Funciton: Quaternary ammonium compound-resistance protein sugE
ykkC-ykkD -174 84.2 AATTGGTTTTCTAGG... BPUM_1202
Bacillus subtilis subsp. subtilis str. 168
Position: -188
Score: 97.12
Sequence: GTAAAGTTTTCTAGG...
Locus tag: BSU13090
Name: ykkC
Funciton: Quaternary ammonium compound-resistance protein sugE
Locus tag: BSU13100
Name: ykkD
Funciton: Quaternary ammonium compound-resistance protein sugE
ykkC-ykkD -188 97.1 GTAAAGTTTTCTAGG... BSU13090
Oceanobacillus iheyensis HTE831
Position: -209
Score: 90.73
Sequence: CGTAAATACTTTCTA...
Locus tag: OB3264
Name: ykkC
Funciton: Quaternary ammonium compound-resistance protein sugE
Locus tag: OB3263
Name: ykkD
Funciton: Quaternary ammonium compound-resistance protein sugE
ykkC-ykkD -209 90.7 CGTAAATACTTTCTA... OB3264
Paenibacillus sp. JDR-2
Position: -180
Score: 85.38
Sequence: TAGTGGTTTTCTAGG...
Locus tag: Pjdr2_5861
Name: ykkC
Funciton: Quaternary ammonium compound-resistance protein sugE
Locus tag: Pjdr2_5862
Name: ykkD
Funciton: Quaternary ammonium compound-resistance protein sugE
ykkC-ykkD -180 85.4 TAGTGGTTTTCTAGG... Pjdr2_5861