Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing queF gene

Properties
Regulator type: RNA regulatory element
Name: PreQ1
RFAM: RF00522
Regulation mode:
Biological process: Queuosine biosynthesis
Effector: Pre-queuosine1
Phylum: Firmicutes
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bacillus amyloliquefaciens FZB42
Position: -53
Score: 43.96
Sequence: CGGGAGAGGTTCTAG...
Locus tag: RBAM_013490
Name: queC
Funciton: Queuosine Biosynthesis QueC ATPase
Locus tag: RBAM_013500
Name: queD
Funciton: Queuosine biosynthesis QueD, PTPS-I
Locus tag: RBAM_013510
Name: queE
Funciton: Queuosine Biosynthesis QueE Radical SAM
Locus tag: RBAM_013520
Name: queF
Funciton: NADPH dependent preQ0 reductase
queC-queD-queE-queF -53 44 CGGGAGAGGTTCTAG... RBAM_013490
Bacillus cereus ATCC 14579
Position: -136
Score: 49.62
Sequence: CGGGAGAGGTTCGCG...
Locus tag: BC1341
Name: queC
Funciton: Queuosine Biosynthesis QueC ATPase
Locus tag: BC1342
Name: queD
Funciton: Queuosine biosynthesis QueD, PTPS-I
Locus tag: BC1343
Name: queE
Funciton: Queuosine Biosynthesis QueE Radical SAM
Locus tag: BC1344
Name: queF
Funciton: NADPH dependent preQ0 reductase
queC-queD-queE-queF -136 49.6 CGGGAGAGGTTCGCG... BC1341
Bacillus clausii KSM-K16
Position: -88
Score: 46.0
Sequence: GAAAGAAGAGGTTCG...
Locus tag: ABC2129
Name: queC
Funciton: Queuosine Biosynthesis QueC ATPase
Locus tag: ABC2128
Name: queD
Funciton: Queuosine biosynthesis QueD, PTPS-I
Locus tag: ABC2127
Name: queE
Funciton: Queuosine Biosynthesis QueE Radical SAM
Locus tag: ABC2126
Name: queF
Funciton: NADPH dependent preQ0 reductase
queC-queD-queE-queF -88 46 GAAAGAAGAGGTTCG... ABC2129
Bacillus halodurans C-125
Position: -166
Score: 48.96
Sequence: TGTGAGAGAGGTTCG...
Locus tag: BH2244
Name: queC
Funciton: Queuosine Biosynthesis QueC ATPase
Locus tag: BH2243
Name: queD
Funciton: Queuosine biosynthesis QueD, PTPS-I
Locus tag: BH2242
Name: queE
Funciton: Queuosine Biosynthesis QueE Radical SAM
Locus tag: BH2241
Name: queF
Funciton: NADPH dependent preQ0 reductase
queC-queD-queE-queF -166 49 TGTGAGAGAGGTTCG... BH2244
Bacillus licheniformis DSM 13
Position: -182
Score: 46.23
Sequence: CGGGAGAGGTTCTAG...
Locus tag: BLi01527
Name: queC
Funciton: Queuosine Biosynthesis QueC ATPase
Locus tag: BLi01528
Name: queD
Funciton: Queuosine biosynthesis QueD, PTPS-I
Locus tag: BLi01529
Name: queE
Funciton: Queuosine Biosynthesis QueE Radical SAM
Locus tag: BLi01530
Name: queF
Funciton: NADPH dependent preQ0 reductase
queC-queD-queE-queF -182 46.2 CGGGAGAGGTTCTAG... BLi01527
Bacillus pumilus SAFR-032
Position: -203
Score: 46.54
Sequence: CGGGAGAGGTTCTAG...
Locus tag: BPUM_1263
Name: queC
Funciton: Queuosine Biosynthesis QueC ATPase
Locus tag: BPUM_1264
Name: queD
Funciton: Queuosine biosynthesis QueD, PTPS-I
Locus tag: BPUM_1265
Name: queE
Funciton: Queuosine Biosynthesis QueE Radical SAM
Locus tag: BPUM_1266
Name: queF
Funciton: NADPH dependent preQ0 reductase
queC-queD-queE-queF -203 46.5 CGGGAGAGGTTCTAG... BPUM_1263
Bacillus subtilis subsp. subtilis str. 168
Position: -173
Score: 43.96
Sequence: CGGGAGAGGTTCTAG...
Locus tag: BSU13720
Name: queC
Funciton: Queuosine Biosynthesis QueC ATPase
Locus tag: BSU13730
Name: queD
Funciton: Queuosine biosynthesis QueD, PTPS-I
Locus tag: BSU13740
Name: queE
Funciton: Queuosine Biosynthesis QueE Radical SAM
Locus tag: BSU13750
Name: queF
Funciton: NADPH dependent preQ0 reductase
queC-queD-queE-queF -173 44 CGGGAGAGGTTCTAG... BSU13720
Geobacillus kaustophilus HTA426
Position: -116
Score: 43.71
Sequence: CGGGAGAGGTTTCTA...
Locus tag: GK0975
Name: queC
Funciton: Queuosine Biosynthesis QueC ATPase
Locus tag: GK0976
Name: queD
Funciton: Queuosine biosynthesis QueD, PTPS-I
Locus tag: GK0977
Name: queE
Funciton: Queuosine Biosynthesis QueE Radical SAM
Locus tag: GK0978
Name: queF
Funciton: NADPH dependent preQ0 reductase
queC-queD-queE-queF -116 43.7 CGGGAGAGGTTTCTA... GK0975
Oceanobacillus iheyensis HTE831
Position: -116
Score: 47.2
Sequence: TTTGTTAGAGGTTCT...
Locus tag: OB2210
Name: queF
Funciton: NADPH dependent preQ0 reductase
Locus tag: OB2209
Name: ypdP
Funciton: Substrate-specific component YpdP (COG1738) of predicted queuosine-regulated ECF transporter
queF-ypdP -116 47.2 TTTGTTAGAGGTTCT... OB2210
Paenibacillus sp. JDR-2
Position: -137
Score: 50.07
Sequence: TTCAGGAGAGGTTCG...
Locus tag: Pjdr2_4316
Name: queC
Funciton: Queuosine Biosynthesis QueC ATPase
Locus tag: Pjdr2_4315
Name: queD
Funciton: Queuosine biosynthesis QueD, PTPS-I
Locus tag: Pjdr2_4314
Name: queE
Funciton: Queuosine Biosynthesis QueE Radical SAM
Locus tag: Pjdr2_4313
Name: queF
Funciton: NADPH dependent preQ0 reductase
queC-queD-queE-queF -137 50.1 TTCAGGAGAGGTTCG... Pjdr2_4316
© 2009-2020 RegPrecise