Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ypdP gene

Properties
Regulator type: RNA regulatory element
Name: PreQ1
RFAM: RF00522
Regulation mode:
Biological process: Queuosine biosynthesis
Effector: Pre-queuosine1
Phylum: Firmicutes
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Staphylococcus aureus subsp. aureus N315
Position: -53
Score: 14.79
Sequence: ATTGAGCGGTTTCTA...
Locus tag: SA1265
Name: ypdP
Funciton: Substrate-specific component YpdP (COG1738) of predicted queuosine-regulated ECF transporter
ypdP -53 14.8 ATTGAGCGGTTTCTA... SA1265
Staphylococcus capitis SK14
Position: -50
Score: 21.6
Sequence: TTTTCGCGGTTTCTA...
Locus tag: STACA0001_1686
Name: ypdP
Funciton: Substrate-specific component YpdP (COG1738) of predicted queuosine-regulated ECF transporter
ypdP -50 21.6 TTTTCGCGGTTTCTA... STACA0001_1686
Staphylococcus carnosus subsp. carnosus TM300
Position: -49
Score: 19.12
Sequence: AGTTTGCGGTTTCTA...
Locus tag: Sca_1074
Name: ypdP
Funciton: Substrate-specific component YpdP (COG1738) of predicted queuosine-regulated ECF transporter
ypdP -49 19.1 AGTTTGCGGTTTCTA... Sca_1074
Staphylococcus epidermidis ATCC 12228
Position: -51
Score: 25.9
Sequence: TTTTGGCGGTTTCTA...
Locus tag: SE1126
Name: ypdP
Funciton: Substrate-specific component YpdP (COG1738) of predicted queuosine-regulated ECF transporter
ypdP -51 25.9 TTTTGGCGGTTTCTA... SE1126
Staphylococcus haemolyticus JCSC1435
Position: -51
Score: 17.75
Sequence: TGTTTTTGCGGTTTC...
Locus tag: SH1474
Name: ypdP
Funciton: Substrate-specific component YpdP (COG1738) of predicted queuosine-regulated ECF transporter
ypdP -51 17.8 TGTTTTTGCGGTTTC... SH1474
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
Position: -53
Score: 20.45
Sequence: TTATTTTGCGGTTTC...
Locus tag: SSP1307
Name: ypdP
Funciton: Substrate-specific component YpdP (COG1738) of predicted queuosine-regulated ECF transporter
ypdP -53 20.5 TTATTTTGCGGTTTC... SSP1307