Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing thiDE gene

Properties
Regulator type: RNA regulatory element
Name: TPP
RFAM: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Phylum: Proteobacteria
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -253
Score: 70.97
Sequence: CCAGCACTTGTCGGA...
Locus tag: Sama_1860
Name: thiC
Funciton: Phosphomethylpyrimidine synthase
Locus tag: Sama_1859
Name: thiDE
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Sama_1858
Name: thiF
Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: Sama_1857
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: Sama_1856
Name: thiG
Funciton: Thiazole synthase
Locus tag: Sama_1855
Name: thiH
Funciton: 2-iminoacetate synthase (EC 1.3.99.n2)
thiC-thiDE-thiF-thiS-thiG-thiH -253 71 CCAGCACTTGTCGGA... Sama_1860
Shewanella denitrificans OS217
Position: -384
Score: 76.33
Sequence: ACCTCTTGTCGGAGT...
Locus tag: Sden_1770
Name: thiC
Funciton: Phosphomethylpyrimidine synthase
Locus tag: Sden_1771
Name: thiDE
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Sden_1772
Name: thiF
Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: Sden_1773
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: Sden_1774
Name: thiG
Funciton: Thiazole synthase
Locus tag: Sden_1775
Name: thiH
Funciton: 2-iminoacetate synthase (EC 1.3.99.n2)
thiC-thiDE-thiF-thiS-thiG-thiH -384 76.3 ACCTCTTGTCGGAGT... Sden_1770
Shewanella frigidimarina NCIMB 400
Position: -307
Score: 75.11
Sequence: TGACATCTTGTCGGA...
Locus tag: Sfri_2201
Name: thiC
Funciton: Phosphomethylpyrimidine synthase
Locus tag: Sfri_2200
Name: thiDE
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Sfri_2199
Name: thiF
Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: Sfri_2198
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: Sfri_2197
Name: thiG
Funciton: Thiazole synthase
Locus tag: Sfri_2196
Name: thiH
Funciton: 2-iminoacetate synthase (EC 1.3.99.n2)
thiC-thiDE-thiF-thiS-thiG-thiH -307 75.1 TGACATCTTGTCGGA... Sfri_2201
Shewanella halifaxensis HAW-EB4
Position: -243
Score: 71.55
Sequence: TCATCTTGTCGGAGT...
Locus tag: Shal_1900
Name: thiC
Funciton: Phosphomethylpyrimidine synthase
Locus tag: Shal_1901
Name: thiDE
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Shal_1902
Name: thiF
Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: Shal_1903
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: Shal_1904
Name: thiG
Funciton: Thiazole synthase
Locus tag: Shal_1905
Name: thiH
Funciton: 2-iminoacetate synthase (EC 1.3.99.n2)
thiC-thiDE-thiF-thiS-thiG-thiH -243 71.6 TCATCTTGTCGGAGT... Shal_1900
Shewanella loihica PV-4
Position: -277
Score: 68.05
Sequence: GCCCCTCTTGTCGGA...
Locus tag: Shew_2096
Name: thiC
Funciton: Phosphomethylpyrimidine synthase
Locus tag: Shew_2095
Name: thiDE
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Shew_2094
Name: thiF
Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: Shew_2093
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: Shew_2092
Name: thiG
Funciton: Thiazole synthase
Locus tag: Shew_2091
Name: thiH
Funciton: 2-iminoacetate synthase (EC 1.3.99.n2)
thiC-thiDE-thiF-thiS-thiG-thiH -277 68.1 GCCCCTCTTGTCGGA... Shew_2096
Shewanella oneidensis MR-1
Position: -261
Score: 72.88
Sequence: GGTCATCTTGTCGGA...
Locus tag: SO_2445
Name: thiC
Funciton: Phosphomethylpyrimidine synthase
Locus tag: SO_2444
Name: thiDE
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: SO_2443
Name: thiF
Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: SO_2442
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: SO_2441
Name: thiG
Funciton: Thiazole synthase
Locus tag: SO_2440
Name: thiH
Funciton: 2-iminoacetate synthase (EC 1.3.99.n2)
thiC-thiDE-thiF-thiS-thiG-thiH -261 72.9 GGTCATCTTGTCGGA... SO_2445
Shewanella pealeana ATCC 700345
Position: -246
Score: 70.97
Sequence: GCTCATCTTGTCGGA...
Locus tag: Spea_2383
Name: thiC
Funciton: Phosphomethylpyrimidine synthase
Locus tag: Spea_2382
Name: thiDE
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Spea_2381
Name: thiF
Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: Spea_2380
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: Spea_2379
Name: thiG
Funciton: Thiazole synthase
Locus tag: Spea_2378
Name: thiH
Funciton: 2-iminoacetate synthase (EC 1.3.99.n2)
thiC-thiDE-thiF-thiS-thiG-thiH -246 71 GCTCATCTTGTCGGA... Spea_2383
Shewanella piezotolerans WP3
Position: -170
Score: 72.89
Sequence: TCATCTTGTCGGAGT...
Locus tag: swp_2330
Name: thiC
Funciton: Phosphomethylpyrimidine synthase
Locus tag: swp_2331
Name: thiDE
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: swp_2332
Name: thiF
Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: swp_2333
Name: null
Funciton: hypothetical protein swp_2333
Locus tag: swp_2334
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: swp_2335
Name: thiG
Funciton: Thiazole synthase
Locus tag: swp_2336
Name: thiH
Funciton: 2-iminoacetate synthase (EC 1.3.99.n2)
thiC-thiDE-thiF-swp_2333-thiS-thiG-thiH -170 72.9 TCATCTTGTCGGAGT... swp_2330
Shewanella putrefaciens CN-32
Position: -298
Score: 72.71
Sequence: TCATCTTGTCGGAGT...
Locus tag: Sputcn32_1922
Name: thiC
Funciton: Phosphomethylpyrimidine synthase
Locus tag: Sputcn32_1923
Name: thiDE
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Sputcn32_1924
Name: thiF
Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: Sputcn32_1925
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: Sputcn32_1926
Name: thiG
Funciton: Thiazole synthase
Locus tag: Sputcn32_1927
Name: thiH
Funciton: 2-iminoacetate synthase (EC 1.3.99.n2)
thiC-thiDE-thiF-thiS-thiG-thiH -298 72.7 TCATCTTGTCGGAGT... Sputcn32_1922
Shewanella sediminis HAW-EB3
Position: -298
Score: 70.21
Sequence: ACATCTTGTCGGAGT...
Locus tag: Ssed_2013
Name: thiC
Funciton: Phosphomethylpyrimidine synthase
Locus tag: Ssed_2014
Name: thiDE
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Ssed_2015
Name: thiF
Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: Ssed_2016
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: Ssed_2017
Name: thiG
Funciton: Thiazole synthase
Locus tag: Ssed_2018
Name: thiH
Funciton: 2-iminoacetate synthase (EC 1.3.99.n2)
thiC-thiDE-thiF-thiS-thiG-thiH -298 70.2 ACATCTTGTCGGAGT... Ssed_2013
Shewanella sp ANA-3
Position: -257
Score: 72.55
Sequence: CCATCTTGTCGGAGT...
Locus tag: Shewana3_1936
Name: thiC
Funciton: Phosphomethylpyrimidine synthase
Locus tag: Shewana3_1937
Name: thiDE
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Shewana3_1938
Name: thiF
Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: Shewana3_1939
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: Shewana3_1940
Name: thiG
Funciton: Thiazole synthase
Locus tag: Shewana3_1941
Name: thiH
Funciton: 2-iminoacetate synthase (EC 1.3.99.n2)
thiC-thiDE-thiF-thiS-thiG-thiH -257 72.6 CCATCTTGTCGGAGT... Shewana3_1936
Shewanella sp MR-4
Position: -256
Score: 72.55
Sequence: CCATCTTGTCGGAGT...
Locus tag: Shewmr4_1881
Name: thiC
Funciton: Phosphomethylpyrimidine synthase
Locus tag: Shewmr4_1882
Name: thiDE
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Shewmr4_1883
Name: thiF
Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: Shewmr4_1884
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: Shewmr4_1885
Name: thiG
Funciton: Thiazole synthase
Locus tag: Shewmr4_1886
Name: thiH
Funciton: 2-iminoacetate synthase (EC 1.3.99.n2)
thiC-thiDE-thiF-thiS-thiG-thiH -256 72.6 CCATCTTGTCGGAGT... Shewmr4_1881
Shewanella sp MR-7
Position: -258
Score: 72.55
Sequence: GCCCATCTTGTCGGA...
Locus tag: Shewmr7_2097
Name: thiC
Funciton: Phosphomethylpyrimidine synthase
Locus tag: Shewmr7_2096
Name: thiDE
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Shewmr7_2095
Name: thiF
Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: Shewmr7_2094
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: Shewmr7_2093
Name: thiG
Funciton: Thiazole synthase
Locus tag: Shewmr7_2092
Name: thiH
Funciton: 2-iminoacetate synthase (EC 1.3.99.n2)
thiC-thiDE-thiF-thiS-thiG-thiH -258 72.6 GCCCATCTTGTCGGA... Shewmr7_2097
Shewanella sp W3-18-1
Position: -300
Score: 75.1
Sequence: ACTCATCTTGTCGGA...
Locus tag: Sputw3181_2086
Name: thiC
Funciton: Phosphomethylpyrimidine synthase
Locus tag: Sputw3181_2085
Name: thiDE
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Sputw3181_2084
Name: thiF
Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: Sputw3181_2083
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: Sputw3181_2082
Name: thiG
Funciton: Thiazole synthase
Locus tag: Sputw3181_2081
Name: thiH
Funciton: 2-iminoacetate synthase (EC 1.3.99.n2)
thiC-thiDE-thiF-thiS-thiG-thiH -300 75.1 ACTCATCTTGTCGGA... Sputw3181_2086
Shewanella woodyi ATCC 51908
Position: -243
Score: 76.33
Sequence: TGGCATCTTGTCGGA...
Locus tag: Swoo_2592
Name: thiC
Funciton: Phosphomethylpyrimidine synthase
Locus tag: Swoo_2591
Name: thiDE
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Swoo_2590
Name: thiF
Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: Swoo_2589
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: Swoo_2588
Name: thiG
Funciton: Thiazole synthase
Locus tag: Swoo_2587
Name: thiH
Funciton: 2-iminoacetate synthase (EC 1.3.99.n2)
thiC-thiDE-thiF-thiS-thiG-thiH -243 76.3 TGGCATCTTGTCGGA... Swoo_2592
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