Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rhaA gene

Properties
Regulog: Crp - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria/gamma
Built upon 2301 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -182
Score: 4.51763
Sequence: AATTGTGAACGCTATCACGTTC
Locus tag: CKO_03100
Name: rhaB
Funciton: rhamnulokinase
Locus tag: CKO_03102
Name: rhaA
Funciton: L-rhamnose isomerase
Locus tag: CKO_03103
Name: rhaD
Funciton: rhamnulose-1-phosphate aldolase
rhaB-rhaA-rhaD -182 4.5 AATTGTGAACGCTATCACGTTC CKO_03100
Enterobacter sp. 638
Position: -129
Score: 4.15974
Sequence: AACTGTGAACTCCCTCACGTTC
Locus tag: Ent638_4067
Name: rhaB
Funciton: rhamnulokinase
Locus tag: Ent638_4068
Name: rhaA
Funciton: L-rhamnose isomerase
Locus tag: Ent638_4069
Name: rhaD
Funciton: rhamnulose-1-phosphate aldolase
rhaB-rhaA-rhaD -129 4.2 AACTGTGAACTCCCTCACGTTC Ent638_4067
Escherichia coli str. K-12 substr. MG1655
Position: -162
Score: 3.78793
Sequence: AAATGCGGTGAGCATCACATCA
Position: -127
Score: 4.43198
Sequence: AATTGTGAACATCATCACGTTC
Locus tag: b3904
Name: rhaB
Funciton: rhamnulokinase
Locus tag: b3903
Name: rhaA
Funciton: L-rhamnose isomerase
Locus tag: b3902
Name: rhaD
Funciton: rhamnulose-1-phosphate aldolase
rhaB-rhaA-rhaD -162 3.8 AAATGCGGTGAGCATCACATCA b3904
-127 4.4 AATTGTGAACATCATCACGTTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -128
Score: 4.23432
Sequence: AACTGTGATGTCCCTCACGGTC
Locus tag: KPN_04213
Name: rhaB
Funciton: rhamnulokinase
Locus tag: KPN_04212
Name: rhaA
Funciton: L-rhamnose isomerase
Locus tag: KPN_04211
Name: rhaD
Funciton: rhamnulose-1-phosphate aldolase
rhaB-rhaA-rhaD -128 4.2 AACTGTGATGTCCCTCACGGTC KPN_04213
Salmonella typhimurium LT2
Position: -247
Score: 3.88013
Sequence: AAGGGTTATCGGCCTCACCTTA
Position: -127
Score: 4.12169
Sequence: AACTGTGAACGCTATCACGTTC
Locus tag: STM4047
Name: rhaB
Funciton: rhamnulokinase
Locus tag: STM4046
Name: rhaA
Funciton: L-rhamnose isomerase
Locus tag: STM4045
Name: rhaD
Funciton: rhamnulose-1-phosphate aldolase
rhaB-rhaA-rhaD -247 3.9 AAGGGTTATCGGCCTCACCTTA STM4047
-127 4.1 AACTGTGAACGCTATCACGTTC
Yersinia pestis KIM
Position: -234
Score: 4.16613
Sequence: AACTGTGAGCTGTTTCACTTTC
Locus tag: y0587
Name: rhaB
Funciton: rhamnulokinase
Locus tag: y0586
Name: rhaA
Funciton: L-rhamnose isomerase
Locus tag: y0585
Name: rhaD
Funciton: rhamnulose-1-phosphate aldolase
rhaB-rhaA-rhaD -234 4.2 AACTGTGAGCTGTTTCACTTTC y0587