Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ybdD gene

Properties
Regulog: Crp - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria/gamma
Built upon 2301 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -134
Score: 4.26718
Sequence: TGAAGTGATCCAGTTAACAATG
Locus tag: CKO_02563
Name: cstA2
Funciton: carbon starvation protein
Locus tag: CKO_02562
Name: ybdD
Funciton: hypothetical protein
cstA2-ybdD -134 4.3 TGAAGTGATCCAGTTAACAATG CKO_02563
Enterobacter sp. 638
Position: -138
Score: 4.32622
Sequence: TAAAGTGATCCGCTTAACACAG
Locus tag: Ent638_1130
Name: cstA2
Funciton: carbon starvation protein
Locus tag: Ent638_1131
Name: ybdD
Funciton: hypothetical protein
cstA2-ybdD -138 4.3 TAAAGTGATCCGCTTAACACAG Ent638_1130
Escherichia coli str. K-12 substr. MG1655
Position: -139
Score: 3.70455
Sequence: CGGAGTGATCGAGTTAACATTG
Locus tag: b0598
Name: cstA2
Funciton: carbon starvation protein
Locus tag: b4512
Name: ybdD
Funciton: hypothetical protein
cstA2-ybdD -139 3.7 CGGAGTGATCGAGTTAACATTG b0598
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -138
Score: 4.08145
Sequence: TTAAGTGATCTCGCTAGCAATG
Locus tag: KPN_00616
Name: cstA2
Funciton: carbon starvation protein
Locus tag: KPN_00617
Name: ybdD
Funciton: hypothetical protein
cstA2-ybdD -138 4.1 TTAAGTGATCTCGCTAGCAATG KPN_00616