Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing nirD gene

Properties
Regulog: Crp - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria/gamma
Built upon 2301 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -76
Score: 3.43249
Sequence: GAATTTGATTTACATCAATAAG
Locus tag: CKO_04789
Name: nirB
Funciton: nitrite reductase (NAD(P)H) subunit
Locus tag: CKO_04790
Name: nirD
Funciton: nitrite reductase small subunit
nirB-nirD -76 3.4 GAATTTGATTTACATCAATAAG CKO_04789
Enterobacter sp. 638
Position: -76
Score: 3.34501
Sequence: GTATTTGATTTGCATCAATAAG
Locus tag: Ent638_3793
Name: nirB
Funciton: nitrite reductase (NAD(P)H) subunit
Locus tag: Ent638_3794
Name: nirD
Funciton: nitrite reductase small subunit
Locus tag: Ent638_3795
Name: nirC
Funciton: nitrite transporter NirC
nirB-nirD-nirC -76 3.3 GTATTTGATTTGCATCAATAAG Ent638_3793
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -186
Score: 4.18587
Sequence: AAGCGTGCTATAGATCTCACTT
Locus tag: ECA4079
Name: nirB
Funciton: nitrite reductase (NAD(P)H) subunit
Locus tag: ECA4080
Name: nirD
Funciton: nitrite reductase small subunit
nirB-nirD -186 4.2 AAGCGTGCTATAGATCTCACTT ECA4079
Escherichia coli str. K-12 substr. MG1655
Position: -124
Score: 3.21461
Sequence: AAAATTTATACAAATCAGCAAT
Position: -76
Score: 3.43249
Sequence: GAATTTGATTTACATCAATAAG
Locus tag: b3365
Name: nirB
Funciton: nitrite reductase (NAD(P)H) subunit
Locus tag: b3366
Name: nirD
Funciton: nitrite reductase small subunit
Locus tag: b3367
Name: nirC
Funciton: nitrite transporter NirC
nirB-nirD-nirC -124 3.2 AAAATTTATACAAATCAGCAAT b3365
-76 3.4 GAATTTGATTTACATCAATAAG
Proteus mirabilis HI4320
Position: -129
Score: 3.52221
Sequence: TTTTGTGCACTTTATTAACAAT
Locus tag: PMI1479
Name: nirB
Funciton: nitrite reductase (NAD(P)H) subunit
Locus tag: PMI1478
Name: nirD
Funciton: nitrite reductase small subunit
nirB-nirD -129 3.5 TTTTGTGCACTTTATTAACAAT PMI1479
Salmonella typhimurium LT2
Position: -76
Score: 3.43249
Sequence: GAATTTGATTTACATCAATAAG
Locus tag: STM3474
Name: nirB
Funciton: nitrite reductase (NAD(P)H) subunit
Locus tag: STM3475
Name: nirD
Funciton: nitrite reductase small subunit
nirB-nirD -76 3.4 GAATTTGATTTACATCAATAAG STM3474
Yersinia pestis KIM
Position: -75
Score: 3.72079
Sequence: CAAATTGATTTACATCAAGAAA
Locus tag: y3945
Name: nirB
Funciton: nitrite reductase (NAD(P)H) subunit
Locus tag: y3944
Name: nirD
Funciton: nitrite reductase small subunit
nirB-nirD -75 3.7 CAAATTGATTTACATCAAGAAA y3945