Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rpoS gene

Properties
Regulog: Crp - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria/gamma
Built upon 2301 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -270
Score: 3.28698
Sequence: TAATCTTATTATCATCAAACAC
Locus tag: CKO_04101
Name: rpoS
Funciton: RNA polymerase sigma factor RpoS
rpoS -270 3.3 TAATCTTATTATCATCAAACAC CKO_04101
Edwardsiella tarda EIB202
Position: -54
Score: 3.47773
Sequence: TAGTTTGAGCAGGATCGCTGTA
Locus tag: ETAE_2873
Name: rpoS
Funciton: RNA polymerase sigma factor RpoS
rpoS -54 3.5 TAGTTTGAGCAGGATCGCTGTA ETAE_2873
Enterobacter sp. 638
Position: -273
Score: 3.27074
Sequence: TACGGTAATCTTATTATCATAA
Locus tag: Ent638_3212
Name: rpoS
Funciton: RNA polymerase sigma factor RpoS
rpoS -273 3.3 TACGGTAATCTTATTATCATAA Ent638_3212
Erwinia amylovora ATCC 49946
Position: -258
Score: 4.10229
Sequence: TAATTTGATTATCATCAAGCAT
Locus tag: EAM_2679
Name: rpoS
Funciton: RNA polymerase sigma factor RpoS
rpoS -258 4.1 TAATTTGATTATCATCAAGCAT EAM_2679
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -261
Score: 3.80795
Sequence: AAATCTGATAATCATCAAGCAT
Locus tag: ECA3530
Name: rpoS
Funciton: RNA polymerase sigma factor RpoS
rpoS -261 3.8 AAATCTGATAATCATCAAGCAT ECA3530
Escherichia coli str. K-12 substr. MG1655
Position: -270
Score: 4.17197
Sequence: TAATCTGATTATCATCAAACAT
Locus tag: b2741
Name: rpoS
Funciton: RNA polymerase sigma factor RpoS
rpoS -270 4.2 TAATCTGATTATCATCAAACAT b2741
Proteus mirabilis HI4320
Position: -216
Score: 3.22609
Sequence: ATAATTGCTGTTAATAACTAAT
Position: -63
Score: 3.23507
Sequence: AACTGGTAAATCGATCTCATTA
Locus tag: PMI2236
Name: rpoS
Funciton: RNA polymerase sigma factor RpoS
rpoS -216 3.2 ATAATTGCTGTTAATAACTAAT PMI2236
-63 3.2 AACTGGTAAATCGATCTCATTA
Salmonella typhimurium LT2
Position: -270
Score: 3.65804
Sequence: TAATCTTATTATCATCAAACAT
Locus tag: STM2924
Name: rpoS
Funciton: RNA polymerase sigma factor RpoS
rpoS -270 3.7 TAATCTTATTATCATCAAACAT STM2924
Serratia proteamaculans 568
Position: -261
Score: 3.35133
Sequence: TAATCTAATCATCATCAAACAC
Locus tag: Spro_0832
Name: rpoS
Funciton: RNA polymerase sigma factor RpoS
rpoS -261 3.4 TAATCTAATCATCATCAAACAC Spro_0832
Yersinia pestis KIM
Position: -262
Score: 3.35133
Sequence: TAATCTAATCATCATCAAACAC
Locus tag: y0834
Name: rpoS
Funciton: RNA polymerase sigma factor RpoS
rpoS -262 3.4 TAATCTAATCATCATCAAACAC y0834
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