Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing paaD gene

Properties
Regulog: Crp - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria/gamma
Built upon 2301 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Escherichia coli str. K-12 substr. MG1655
Position: -97
Score: 4.27766
Sequence: ATTTGTGATTTTACTTAACTAT
Position: -76
Score: 3.6341
Sequence: TTGTGTAACTTTCATAAAACAA
Position: -45
Score: 3.61284
Sequence: TGTTTTTAATTAATTCACGAAA
Locus tag: b1388
Name: paaA
Funciton: predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation
Locus tag: b1389
Name: paaB
Funciton: predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation
Locus tag: b1390
Name: paaC
Funciton: predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation
Locus tag: b1391
Name: paaD
Funciton: predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation
Locus tag: b1392
Name: paaE
Funciton: predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation
Locus tag: b1393
Name: paaF
Funciton: enoyl-CoA hydratase-isomerase
Locus tag: b1394
Name: paaG
Funciton: enoyl-CoA hydratase
Locus tag: b1395
Name: paaH
Funciton: 3-hydroxybutyryl-CoA dehydrogenase
Locus tag: b1396
Name: paaI
Funciton: predicted thioesterase
Locus tag: b1397
Name: paaJ
Funciton: acetyl-CoA acetyltransferase
Locus tag: b1398
Name: paaK
Funciton: phenylacetyl-CoA ligase
paaA-paaB-paaC-paaD-paaE-paaF-paaG-paaH-paaI-paaJ-paaK -97 4.3 ATTTGTGATTTTACTTAACTAT b1388
-76 3.6 TTGTGTAACTTTCATAAAACAA
-45 3.6 TGTTTTTAATTAATTCACGAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -197
Score: 3.75961
Sequence: CATTGTGATCGCGATGGCGTTA
Position: -131
Score: 3.68706
Sequence: TTTTGCGGAGATTATCACAAAA
Locus tag: KPN_01469
Name: paaA
Funciton: predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation
Locus tag: KPN_01470
Name: paaB
Funciton: predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation
Locus tag: KPN_01471
Name: paaC
Funciton: predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation
Locus tag: KPN_01472
Name: paaD
Funciton: predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation
Locus tag: KPN_01473
Name: paaE
Funciton: predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation
Locus tag: KPN_01474
Name: paaF
Funciton: enoyl-CoA hydratase-isomerase
Locus tag: KPN_01475
Name: paaG
Funciton: enoyl-CoA hydratase
Locus tag: KPN_01476
Name: paaH
Funciton: 3-hydroxybutyryl-CoA dehydrogenase
paaA-paaB-paaC-paaD-paaE-paaF-paaG-paaH -197 3.8 CATTGTGATCGCGATGGCGTTA KPN_01469
-131 3.7 TTTTGCGGAGATTATCACAAAA
Serratia proteamaculans 568
Position: -134
Score: 3.83832
Sequence: ACCTGTGAGTAACATCGCAAAA
Position: -63
Score: 3.8328
Sequence: TTAGTTAACGTGATTCACATTT
Locus tag: Spro_3072
Name: paaA
Funciton: predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation
Locus tag: Spro_3073
Name: paaB
Funciton: predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation
Locus tag: Spro_3074
Name: paaC
Funciton: predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation
Locus tag: Spro_3075
Name: paaD
Funciton: predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation
Locus tag: Spro_3076
Name: paaE
Funciton: predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation
Locus tag: Spro_3077
Name: paaF
Funciton: enoyl-CoA hydratase-isomerase
Locus tag: Spro_3078
Name: paaG
Funciton: phenylacetate degradation probable enoyl-CoA hydratase paaB
Locus tag: Spro_3079
Name: paaH
Funciton: 3-hydroxybutyryl-CoA dehydrogenase
Locus tag: Spro_3080
Name: paaI
Funciton: predicted thioesterase
Locus tag: Spro_3081
Name: paaJ
Funciton: acetyl-CoA acetyltransferase
Locus tag: Spro_3082
Name: paaK
Funciton: phenylacetyl-CoA ligase
paaA-paaB-paaC-paaD-paaE-paaF-paaG-paaH-paaI-paaJ-paaK -134 3.8 ACCTGTGAGTAACATCGCAAAA Spro_3072
-63 3.8 TTAGTTAACGTGATTCACATTT