Orthologous regulated operons containing cbiK gene
| Regulator type: | RNA regulatory element |
| Name: | Cobalamin |
| RFAM: | RF00174 |
| Regulation mode: | |
| Biological process: | Cobalamin biosynthesis |
| Effector: | Adenosylcobalamin |
| Phylum: | Chlorobiales |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Chlorobaculum parvum NCIB 8327 | ||||
|
Position: -616
Score: 91.81 Sequence: ATACTTCATCCGAAC...
Locus tag: Cpar_1485
Name: porB Funciton: Predicted porin, Gram-negative type
Locus tag: Cpar_1484
Name: cbiM Funciton: Substrate-specific component CbiM of cobalt ECF transporter
Locus tag: Cpar_1483
Name: cbiN Funciton: Additional substrate-specific component CbiN of cobalt ECF transporter
Locus tag: Cpar_1482
Name: cbiQ Funciton: Transmembrane component CbiQ of energizing module of cobalt ECF transporter
Locus tag: Cpar_1481
Name: cbiO Funciton: ATPase component CbiO of energizing module of cobalt ECF transporter
Locus tag: Cpar_1480
Name: cobA Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Locus tag: Cpar_1479
Name: cbiK Funciton: Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
Locus tag: Cpar_1478
Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: Cpar_1477
Name: cbiHC Funciton: Cobalt-precorrin-3b C17-methyltransferase / Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: Cpar_1476
Name: cbiET Funciton: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
Locus tag: Cpar_1475
Name: cbiGF Funciton: Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
Locus tag: Cpar_1474
Name: cbiJD Funciton: Cobalt-precorrin-6x reductase (EC 1.3.1.54) / Cobalt-precorrin-6 synthase, anaerobic |
||||
| porB-cbiM-cbiN-cbiQ-cbiO-cobA-cbiK-cbiL-cbiHC-cbiET-cbiGF-cbiJD | -616 | 91.8 | ATACTTCATCCGAAC... | Cpar_1485 |
| Chlorobium limicola DSM 245 | ||||
|
Position: -509
Score: 74.69 Sequence: TCTTTCTCGTCATAA...
Locus tag: Clim_1001
Name: btuB7 Funciton: Outer membrane vitamin B12 receptor BtuB
Locus tag: Clim_1002
Name: null Funciton: 4Fe-4S ferredoxin iron-sulfur binding domain protein
Locus tag: Clim_1003
Name: btuF Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: Clim_1004
Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Clim_1005
Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: Clim_1006
Name: btuF2 Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: Clim_1007
Name: cbiZ Funciton: Adenosylcobinamide amidohydrolase (EC 3.5.1.90)
Locus tag: Clim_1008
Name: PF00795 Funciton: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein
Locus tag: Clim_1009
Name: cobA Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Locus tag: Clim_1010
Name: cbiK Funciton: Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
Locus tag: Clim_1011
Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: Clim_1012
Name: cbiHC Funciton: Cobalt-precorrin-3b C17-methyltransferase / Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: Clim_1013
Name: cbiET Funciton: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
Locus tag: Clim_1014
Name: cbiGF Funciton: Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) |
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| btuB7-Clim_1002-btuF-btuC-btuD-btuF2-cbiZ-PF00795-cobA-cbiK-cbiL-cbiHC-cbiET-cbiGF | -509 | 74.7 | TCTTTCTCGTCATAA... | Clim_1001 |
| Prosthecochloris aestuarii DSM 271 | ||||
|
Position: -518
Score: 81.88 Sequence: TGTTCTTTCGCTTGT...
Locus tag: Paes_1301
Name: btuB7 Funciton: Outer membrane vitamin B12 receptor BtuB
Locus tag: Paes_1300
Name: null Funciton: 4Fe-4S ferredoxin iron-sulfur binding domain protein
Locus tag: Paes_1299
Name: btuF Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: Paes_1298
Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Paes_1297
Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: Paes_1296
Name: btuF2 Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: Paes_1295
Name: cbiZ Funciton: Adenosylcobinamide amidohydrolase (EC 3.5.1.90)
Locus tag: Paes_1294
Name: PF00795 Funciton: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein
Locus tag: Paes_1293
Name: cobA Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Locus tag: Paes_1292
Name: cbiK Funciton: Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
Locus tag: Paes_1291
Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: Paes_1290
Name: cbiHC Funciton: Cobalt-precorrin-3b C17-methyltransferase / Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: Paes_1289
Name: cbiET Funciton: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
Locus tag: Paes_1288
Name: cbiGF Funciton: Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
Locus tag: Paes_1287
Name: cbiJ Funciton: Precorrin-6x reductase CbiJ (EC 1.3.1.54)
Locus tag: Paes_1286
Name: cbiD Funciton: Cobalt-precorrin-6 synthase, anaerobic |
||||
| btuB7-Paes_1300-btuF-btuC-btuD-btuF2-cbiZ-PF00795-cobA-cbiK-cbiL-cbiHC-cbiET-cbiGF-cbiJ-cbiD | -518 | 81.9 | TGTTCTTTCGCTTGT... | Paes_1301 |