Orthologous regulated operons containing trpC gene
Regulator type: | RNA regulatory element |
Name: | T-box |
RFAM: | RF00230 |
Regulation mode: | |
Biological process: | Amino acid metabolism |
Effector: | Trp-tRNA |
Phylum: | Firmicutes |
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Operon | Position | Score | Sequence | Locus Tag of the First Gene |
---|---|---|---|---|
Clostridium acetobutylicum ATCC 824 | ||||
Position: -395
Score: 100.36 Sequence: ATACAAGTCTGTGAA...
Locus tag: CAC3163
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: CAC3162
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAb@PabAb
Locus tag: CAC3161
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: CAC3160
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48)
Locus tag: CAC3159
Name: trpF Funciton: Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: CAC3158
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: CAC3157
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
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trpE-trpG-trpD-trpC-trpF-trpB-trpA | -395 | 100.4 | ATACAAGTCTGTGAA... | CAC3163 |
Clostridium beijerincki NCIMB 8052 | ||||
Position: -193
Score: 19.12 Sequence: AATATAGAGTTAGAA...
Locus tag: Cbei_1749
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: Cbei_1750
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAb@PabAb
Locus tag: Cbei_1751
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: Cbei_1752
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48)
Locus tag: Cbei_1753
Name: trpF Funciton: Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: Cbei_1754
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: Cbei_1755
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
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trpE-trpG-trpD-trpC-trpF-trpB-trpA | -193 | 19.1 | AATATAGAGTTAGAA... | Cbei_1749 |
Clostridium bolteae ATCC BAA-613 | ||||
Position: -486
Score: 68.94 Sequence: TAAAAAACTGTTGAG...
Locus tag: CLOBOL_04492
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: CLOBOL_04491
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAb@PabAb
Locus tag: CLOBOL_04490
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: CLOBOL_04489
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48)
Locus tag: CLOBOL_04488
Name: trpF Funciton: Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: CLOBOL_04487
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: CLOBOL_04486
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
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trpE-trpG-trpD-trpC-trpF-trpB-trpA | -486 | 68.9 | TAAAAAACTGTTGAG... | CLOBOL_04492 |
Clostridium cellulolyticum H10 | ||||
Position: -334
Score: 81.96 Sequence: TTAAACCGTTGATGT...
Locus tag: Ccel_3213
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: Ccel_3214
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAb@PabAb
Locus tag: Ccel_3215
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: Ccel_3216
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48)
Locus tag: Ccel_3217
Name: trpF Funciton: Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: Ccel_3218
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: Ccel_3219
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
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trpE-trpG-trpD-trpC-trpF-trpB-trpA | -334 | 82 | TTAAACCGTTGATGT... | Ccel_3213 |
Clostridium kluyveri DSM 555 | ||||
Position: -366
Score: 89.95 Sequence: TAAATCCTATGAGCA...
Locus tag: CKL_1274
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: CKL_1275
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAb@PabAb
Locus tag: CKL_1276
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: CKL_1277
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48)
Locus tag: CKL_1278
Name: trpF Funciton: Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: CKL_1279
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: CKL_1280
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
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trpE-trpG-trpD-trpC-trpF-trpB-trpA | -366 | 89.9 | TAAATCCTATGAGCA... | CKL_1274 |
Clostridium leptum DSM 753 | ||||
Position: -453
Score: 88.9 Sequence: ATTCAAACCGTTGAA...
Locus tag: CLOLEP_01664
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: CLOLEP_01663
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAb@PabAb
Locus tag: CLOLEP_01662
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: CLOLEP_01661
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48)
Locus tag: CLOLEP_01660
Name: trpF Funciton: Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: CLOLEP_01659
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: CLOLEP_01658
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
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trpE-trpG-trpD-trpC-trpF-trpB-trpA | -453 | 88.9 | ATTCAAACCGTTGAA... | CLOLEP_01664 |
Clostridium nexile DSM 1787 | ||||
Position: -394
Score: 84.26 Sequence: CGTCAAACCGTTGAA...
Locus tag: CLONEX_03129
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: CLONEX_03128
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAb@PabAb
Locus tag: CLONEX_03127
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: CLONEX_03126
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48)
Locus tag: CLONEX_03125
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: CLONEX_03124
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
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trpE-trpG-trpD-trpC-trpB-trpA | -394 | 84.3 | CGTCAAACCGTTGAA... | CLONEX_03129 |
Clostridium sp. L2-50 | ||||
Position: -382
Score: 91.92 Sequence: AAACAAACCAATGAG...
Locus tag: CLOL250_01008
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: CLOL250_01007
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAb@PabAb
Locus tag: CLOL250_01006
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: CLOL250_01005
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48)
Locus tag: CLOL250_01004
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: CLOL250_01003
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
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trpE-trpG-trpD-trpC-trpB-trpA | -382 | 91.9 | AAACAAACCAATGAG... | CLOL250_01008 |
Clostridium sp. SS2/1 | ||||
Position: -406
Score: 73.21 Sequence: GATAAATCCGATGAA...
Locus tag: CLOSS21_01327
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: CLOSS21_01326
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: CLOSS21_01325
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48)
Locus tag: CLOSS21_01324
Name: trpF Funciton: Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: CLOSS21_01323
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: CLOSS21_01322
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
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trpE-trpD-trpC-trpF-trpB-trpA | -406 | 73.2 | GATAAATCCGATGAA... | CLOSS21_01327 |