Orthologous regulated operons containing serS gene
| Regulator type: | RNA regulatory element |
| Name: | T-box |
| RFAM: | RF00230 |
| Regulation mode: | |
| Biological process: | Amino acid metabolism |
| Effector: | Ser-tRNA |
| Phylum: | Firmicutes |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Lactobacillus acidophilus NCFM | ||||
|
Position: -253
Score: 77.61 Sequence: AAAATAGACGCAAAC...
Locus tag: LBA1626
Name: serS Funciton: Seryl-tRNA synthetase (EC 6.1.1.11) |
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| serS | -253 | 77.6 | AAAATAGACGCAAAC... | LBA1626 |
| Lactobacillus brevis ATCC 367 | ||||
|
Position: -240
Score: 53.03 Sequence: AATAAACACGAGGTG...
Locus tag: LVIS_1710
Name: serS Funciton: Seryl-tRNA synthetase (EC 6.1.1.11) |
||||
| serS | -240 | 53 | AATAAACACGAGGTG... | LVIS_1710 |
| Lactobacillus casei ATCC 334 | ||||
|
Position: -257
Score: 65.2 Sequence: AGCAAACACGTCTGA...
Locus tag: LSEI_1836
Name: serS Funciton: Seryl-tRNA synthetase (EC 6.1.1.11) |
||||
| serS | -257 | 65.2 | AGCAAACACGTCTGA... | LSEI_1836 |
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | ||||
|
Position: -251
Score: 68.83 Sequence: GCGAATAGCATAGAA...
Locus tag: LBUL_1748
Name: serS Funciton: Seryl-tRNA synthetase (EC 6.1.1.11) |
||||
| serS | -251 | 68.8 | GCGAATAGCATAGAA... | LBUL_1748 |
| Lactobacillus fermentum IFO 3956 | ||||
|
Position: -249
Score: 68.99 Sequence: TAAAATGGCTGTAAT...
Locus tag: LAF_0066
Name: serS Funciton: Seryl-tRNA synthetase (EC 6.1.1.11) |
||||
| serS | -249 | 69 | TAAAATGGCTGTAAT... | LAF_0066 |
| Lactobacillus helveticus DPC 4571 | ||||
|
Position: -261
Score: 69.17 Sequence: CAGAATGGCTTAAAA...
Locus tag: lhv_1734
Name: serS Funciton: Seryl-tRNA synthetase (EC 6.1.1.11) |
||||
| serS | -261 | 69.2 | CAGAATGGCTTAAAA... | lhv_1734 |
| Lactobacillus johnsonii NCC 533 | ||||
|
Position: -249
Score: 69.44 Sequence: GCATGATATAATGCA...
Locus tag: LJ0676
Name: serS Funciton: Seryl-tRNA synthetase (EC 6.1.1.11) |
||||
| serS | -249 | 69.4 | GCATGATATAATGCA... | LJ0676 |
| Lactobacillus plantarum WCFS1 | ||||
|
Position: -240
Score: 70.2 Sequence: AAAGCGCAAACATAA...
Locus tag: lp_0501
Name: serS Funciton: Seryl-tRNA synthetase (EC 6.1.1.11) |
||||
| serS | -240 | 70.2 | AAAGCGCAAACATAA... | lp_0501 |
| Lactobacillus reuteri JCM 1112 | ||||
|
Position: -241
Score: 63.5 Sequence: AGAAAACACGAATGC...
Locus tag: LAR_0091
Name: serS Funciton: Seryl-tRNA synthetase (EC 6.1.1.11) |
||||
| serS | -241 | 63.5 | AGAAAACACGAATGC... | LAR_0091 |
| Lactobacillus rhamnosus GG | ||||
|
Position: -353
Score: 73.86 Sequence: AGTAAACACGTCTGA...
Locus tag: LGG_01893
Name: serS Funciton: Seryl-tRNA synthetase (EC 6.1.1.11) |
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| serS | -353 | 73.9 | AGTAAACACGTCTGA... | LGG_01893 |
| Lactobacillus sakei subsp. sakei 23K | ||||
|
Position: -257
Score: 79.14 Sequence: GAAAAACACGTGAAT...
Locus tag: LSA1803
Name: serS Funciton: Seryl-tRNA synthetase (EC 6.1.1.11) |
||||
| serS | -257 | 79.1 | GAAAAACACGTGAAT... | LSA1803 |
| Lactobacillus salivarius subsp. salivarius UCC118 | ||||
|
Position: -250
Score: 63.09 Sequence: AAACATCGGAGTTCG...
Locus tag: LSL_0189
Name: serS Funciton: Seryl-tRNA synthetase (EC 6.1.1.11) |
||||
| serS | -250 | 63.1 | AAACATCGGAGTTCG... | LSL_0189 |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | ||||
|
Position: -248
Score: 69.88 Sequence: CATCAGTTACCATAA...
Locus tag: LEUM_0182
Name: serS Funciton: Seryl-tRNA synthetase (EC 6.1.1.11) |
||||
| serS | -248 | 69.9 | CATCAGTTACCATAA... | LEUM_0182 |
| Pediococcus pentosaceus ATCC 25745 | ||||
|
Position: -236
Score: 55.16 Sequence: AATAGAGAAATTAAA...
Locus tag: PEPE_1436
Name: serS Funciton: Seryl-tRNA synthetase (EC 6.1.1.11) |
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| serS | -236 | 55.2 | AATAGAGAAATTAAA... | PEPE_1436 |