Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing nagD gene

Properties
Regulog: NagC - Enterobacteriales
Regulator type: Transcription factor
Regulator family: ROK
Regulation mode: repressor (activator)
Biological process: N-acetylglucosamine utilization
Effector: N-acetylglucosamine-6-phosphate
Phylum: Proteobacteria/gamma
Built upon 68 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -215
Score: 5.96973
Sequence: ATTAATTCGTATCGCAAATTAAA
Position: -121
Score: 4.58906
Sequence: CTTATTTTATCATTCAAAAAATC
Locus tag: CKO_02486
Name: nagB
Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Locus tag: CKO_02487
Name: nagA
Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Locus tag: CKO_02488
Name: nagC
Funciton: N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family
Locus tag: CKO_02489
Name: nagD
Funciton: Phosphatase NagD predicted to act in N-acetylglucosamine utilization subsystem
nagB-nagA-nagC-nagD -215 6 ATTAATTCGTATCGCAAATTAAA CKO_02486
-121 4.6 CTTATTTTATCATTCAAAAAATC
Enterobacter sp. 638
Position: -215
Score: 5.96973
Sequence: ATTAATTCGTATCGCAAATTAAA
Position: -121
Score: 4.58906
Sequence: CTTATTTTATCATTCAAAAAATC
Locus tag: Ent638_1193
Name: nagB
Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Locus tag: Ent638_1192
Name: nagA
Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Locus tag: Ent638_1191
Name: nagC
Funciton: N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family
Locus tag: Ent638_1190
Name: nagD
Funciton: Phosphatase NagD predicted to act in N-acetylglucosamine utilization subsystem
nagB-nagA-nagC-nagD -215 6 ATTAATTCGTATCGCAAATTAAA Ent638_1193
-121 4.6 CTTATTTTATCATTCAAAAAATC
Erwinia amylovora ATCC 49946
Position: -225
Score: 5.38068
Sequence: ATAAATTCGTACAGCAAATTAAT
Position: -131
Score: 4.82487
Sequence: CTTATTTTATGATTCAAAAAATC
Locus tag: EAM_1147
Name: nagB
Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Locus tag: EAM_1146
Name: nagA
Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Locus tag: EAM_1145
Name: nagC
Funciton: N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family
Locus tag: EAM_1144
Name: nagD
Funciton: Phosphatase NagD predicted to act in N-acetylglucosamine utilization subsystem
nagB-nagA-nagC-nagD -225 5.4 ATAAATTCGTACAGCAAATTAAT EAM_1147
-131 4.8 CTTATTTTATGATTCAAAAAATC
Escherichia coli str. K-12 substr. MG1655
Position: -209
Score: 5.90523
Sequence: TTTAATTCGTATCGCAAATTAAA
Position: -115
Score: 4.58906
Sequence: CTTATTTTATCATTCAAAAAATC
Locus tag: b0678
Name: nagB
Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Locus tag: b0677
Name: nagA
Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Locus tag: b0676
Name: nagC
Funciton: N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family
Locus tag: b0675
Name: nagD
Funciton: Phosphatase NagD predicted to act in N-acetylglucosamine utilization subsystem
nagB-nagA-nagC-nagD -209 5.9 TTTAATTCGTATCGCAAATTAAA b0678
-115 4.6 CTTATTTTATCATTCAAAAAATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -214
Score: 5.96973
Sequence: ATTAATTCGTATCGCAAATTAAA
Position: -120
Score: 4.58906
Sequence: CTTATTTTATCATTCAAAAAATC
Locus tag: KPN_00699
Name: nagB
Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Locus tag: KPN_00698
Name: nagA
Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Locus tag: KPN_00697
Name: nagC
Funciton: N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family
Locus tag: KPN_00696
Name: nagD
Funciton: Phosphatase NagD predicted to act in N-acetylglucosamine utilization subsystem
nagB-nagA-nagC-nagD -214 6 ATTAATTCGTATCGCAAATTAAA KPN_00699
-120 4.6 CTTATTTTATCATTCAAAAAATC
Salmonella typhimurium LT2
Position: -202
Score: 5.79918
Sequence: ATTAATTCGCCTCGCAAATTAAA
Position: -108
Score: 4.82487
Sequence: CTTATTTTATGATTCAAAAAATC
Locus tag: STM0684
Name: nagB
Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Locus tag: STM0683
Name: nagA
Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Locus tag: STM0682
Name: nagC
Funciton: N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family
Locus tag: STM0681
Name: nagD
Funciton: Phosphatase NagD predicted to act in N-acetylglucosamine utilization subsystem
nagB-nagA-nagC-nagD -202 5.8 ATTAATTCGCCTCGCAAATTAAA STM0684
-108 4.8 CTTATTTTATGATTCAAAAAATC
Serratia proteamaculans 568
Position: -225
Score: 5.98176
Sequence: ATTATTTCGTATCGCAAATTAAA
Locus tag: Spro_1227
Name: nagB
Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Locus tag: Spro_1226
Name: nagA
Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Locus tag: Spro_1225
Name: nagC
Funciton: N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family
Locus tag: Spro_1224
Name: nagD
Funciton: Phosphatase NagD predicted to act in N-acetylglucosamine utilization subsystem
nagB-nagA-nagC-nagD -225 6 ATTATTTCGTATCGCAAATTAAA Spro_1227
Yersinia pestis KIM
Position: -245
Score: 5.98176
Sequence: ATTATTTCGTAACGCAAATTAAA
Position: -151
Score: 5.1614
Sequence: CTTATTTTATCATCCGAAAAAAT
Locus tag: y1202
Name: nagB
Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Locus tag: y1201
Name: nagA
Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Locus tag: y1200
Name: nagC
Funciton: N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family
Locus tag: y1199
Name: nagD
Funciton: Phosphatase NagD predicted to act in N-acetylglucosamine utilization subsystem
nagB-nagA-nagC-nagD -245 6 ATTATTTCGTAACGCAAATTAAA y1202
-151 5.2 CTTATTTTATCATCCGAAAAAAT
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