Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rhc gene

Properties
Regulator type: RNA regulatory element
Name: T-box
RFAM: RF00230
Regulation mode:
Biological process: Amino acid metabolism
Effector: Met-tRNA
Phylum: Firmicutes
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Lactobacillus acidophilus NCFM
Position: -308
Score: 75.51
Sequence: AAGCGACGAAGAAAA...
Locus tag: LBA1080
Name: metE2
Funciton: Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14)
Locus tag: LBA1081
Name: rhc
Funciton: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
metE2-rhc -308 75.5 AAGCGACGAAGAAAA... LBA1080
Lactobacillus casei ATCC 334
Position: -486
Score: 66.84
Sequence: CAGATTGCTTTGCGG...
Locus tag: LSEI_0764
Name: metE2
Funciton: Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14)
Locus tag: LSEI_0765
Name: rhc
Funciton: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
metE2-rhc -486 66.8 CAGATTGCTTTGCGG... LSEI_0764
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
Position: -375
Score: 67.24
Sequence: GGGAAAAGCTCTGAA...
Locus tag: LBUL_1233
Name: rhc
Funciton: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
Locus tag: LBUL_1232
Name: metE
Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
rhc-metE -375 67.2 GGGAAAAGCTCTGAA... LBUL_1233
Lactobacillus fermentum IFO 3956
Position: -316
Score: 72.06
Sequence: AGAAACAGCTGAGAA...
Locus tag: LAF_1601
Name: metE2
Funciton: Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14)
Locus tag: LAF_1600
Name: rhc
Funciton: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
metE2-rhc -316 72.1 AGAAACAGCTGAGAA... LAF_1601
Lactobacillus helveticus DPC 4571
Position: -373
Score: 67.22
Sequence: GAAAAGCTCTGAAGA...
Locus tag: lhv_1913
Name: rhc
Funciton: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
Locus tag: lhv_1914
Name: metE
Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
rhc-metE -373 67.2 GAAAAGCTCTGAAGA... lhv_1913
Lactobacillus johnsonii NCC 533
Position: -459
Score: 93.32
Sequence: TTAAAGCTTAGAAAA...
Locus tag: LJ0632
Name: metE2
Funciton: Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14)
Locus tag: LJ0631
Name: rhc
Funciton: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
metE2-rhc -459 93.3 TTAAAGCTTAGAAAA... LJ0632
Lactobacillus reuteri JCM 1112
Position: -329
Score: 82.17
Sequence: AGATATTGCTTAGAA...
Locus tag: LAR_1486
Name: rhc
Funciton: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
Locus tag: LAR_1485
Name: metQ
Funciton: Methionine ABC transporter substrate-binding protein
rhc-metQ -329 82.2 AGATATTGCTTAGAA... LAR_1486
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