Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing atcL gene

Properties
Regulator type: RNA regulatory element
Name: yybP-ykoY
RFAM: RF00080
Regulation mode:
Biological process:
Effector:
Phylum: Firmicutes
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Clostridium bartlettii DSM 16795
Position: -171
Score: 70.46
Sequence: TTTCCCTCGAAGGGG...
Locus tag: CLOBAR_01021
Name: atcL
Funciton: Calcium-transporting ATPase (EC 3.6.3.8)
atcL -171 70.5 TTTCCCTCGAAGGGG... CLOBAR_01021
Clostridium beijerincki NCIMB 8052
Position: -347
Score: 48.51
Sequence: TCACTACATTAAAAG...
Locus tag: Cbei_0306
Name: atcL
Funciton: Calcium-transporting ATPase (EC 3.6.3.8)
atcL -347 48.5 TCACTACATTAAAAG... Cbei_0306
Clostridium bolteae ATCC BAA-613
Position: -268
Score: 33.8
Sequence: GGAACAGCTCGAAAG...
Locus tag: CLOBOL_04443
Name: atcL
Funciton: Calcium-transporting ATPase (EC 3.6.3.8)
atcL -268 33.8 GGAACAGCTCGAAAG... CLOBOL_04443
Clostridium botulinum A str. ATCC 3502
Position: -412
Score: 46.37
Sequence: ATGTGTTATTAAAAG...
Locus tag: CBO1545
Name: atcL
Funciton: Calcium-transporting ATPase (EC 3.6.3.8)
atcL -412 46.4 ATGTGTTATTAAAAG... CBO1545
Clostridium butyricum 5521
Position: -203
Score: 39.01
Sequence: TGGATTTGTTAAAGG...
Locus tag: CBY_1177
Name: atcL
Funciton: Calcium-transporting ATPase (EC 3.6.3.8)
atcL -203 39 TGGATTTGTTAAAGG... CBY_1177
Clostridium difficile 630
Position: -238
Score: 66.9
Sequence: ATAACTACTCGAAGG...
Locus tag: CD2503
Name: atcL
Funciton: Calcium-transporting ATPase (EC 3.6.3.8)
atcL -238 66.9 ATAACTACTCGAAGG... CD2503
Clostridium hiranonis DSM 13275
Position: -218
Score: 56.34
Sequence: TACTTCTCGAAGGGG...
Locus tag: CLOHIR_02014
Name: atcL
Funciton: Calcium-transporting ATPase (EC 3.6.3.8)
atcL -218 56.3 TACTTCTCGAAGGGG... CLOHIR_02014
Clostridium nexile DSM 1787
Position: -203
Score: 55.6
Sequence: TTTTATAGATAAAAG...
Locus tag: CLONEX_03625
Name: atcL
Funciton: Calcium-transporting ATPase (EC 3.6.3.8)
atcL -203 55.6 TTTTATAGATAAAAG... CLONEX_03625
Clostridium perfringens ATCC 13124
Position: -245
Score: 42.61
Sequence: CTATTGTGTTAAGAG...
Locus tag: CPF_0317
Name: atcL
Funciton: Calcium-transporting ATPase (EC 3.6.3.8)
atcL -245 42.6 CTATTGTGTTAAGAG... CPF_0317
Clostridium phytofermentans ISDg
Position: -321
Score: 45.71
Sequence: TAAAATACTCGTGAG...
Locus tag: null
Name: atcL
Funciton: Calcium-transporting ATPase (EC 3.6.3.8)
atcL -321 45.7 TAAAATACTCGTGAG... null
Clostridium scindens ATCC 35704
Position: -178
Score: 51.47
Sequence: GTAATAATAAAAGGG...
Locus tag: CLOSCI_02991
Name: atcL
Funciton: Calcium-transporting ATPase (EC 3.6.3.8)
atcL -178 51.5 GTAATAATAAAAGGG... CLOSCI_02991
Clostridium sp. L2-50
Position: -121
Score: 63.35
Sequence: ATCATTCAAAAAGGG...
Locus tag: CLOL250_02208
Name: atcL
Funciton: Calcium-transporting ATPase (EC 3.6.3.8)
atcL -121 63.3 ATCATTCAAAAAGGG... CLOL250_02208
Clostridium tetani E88
Position: -368
Score: 58.77
Sequence: TACTATATAAAGGGG...
Locus tag: CTC00664
Name: atcL
Funciton: Calcium-transporting ATPase (EC 3.6.3.8)
atcL -368 58.8 TACTATATAAAGGGG... CTC00664
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