Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing COG3382 gene

Properties
Regulator type: RNA regulatory element
Name: ykkC-yxkD
RFAM: RF00442
Regulation mode:
Biological process: Multidrug resistance
Effector:
Phylum: Firmicutes
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Clostridium beijerincki NCIMB 8052
Position: -155
Score: 82.03
Sequence: TATTTAAGTTTTCTA...
Locus tag: Cbei_3447
Name: COG3382
Funciton: Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta
Locus tag: Cbei_3446
Name: COG731
Funciton: Putative Fe-S oxidoreductase
Locus tag: Cbei_3445
Name: ykkD
Funciton: Quaternary ammonium compound-resistance protein sugE
COG3382-COG731-ykkD -155 82 TATTTAAGTTTTCTA... Cbei_3447
Clostridium difficile 630
Position: -159
Score: 81.89
Sequence: TAATTTAGTTTTCTA...
Locus tag: CD2392
Name: COG3382
Funciton: Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta
COG3382 -159 81.9 TAATTTAGTTTTCTA... CD2392
Clostridium perfringens ATCC 13124
Position: -150
Score: 87.48
Sequence: ATATAAAGTTTTCTA...
Locus tag: CPF_1040
Name: COG3382
Funciton: Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta
Locus tag: CPF_1039
Name: COG731
Funciton: Putative Fe-S oxidoreductase
COG3382-COG731 -150 87.5 ATATAAAGTTTTCTA... CPF_1040
Clostridium sp. OhILAs
Position: -157
Score: 77.33
Sequence: TTTAAGTTTTCTAGG...
Locus tag: Clos_1298
Name: COG3382
Funciton: Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta
Locus tag: Clos_1299
Name: COG731
Funciton: Putative Fe-S oxidoreductase
COG3382-COG731 -157 77.3 TTTAAGTTTTCTAGG... Clos_1298
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