Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ykkD gene

Properties
Regulator type: RNA regulatory element
Name: ykkC-yxkD
RFAM: RF00442
Regulation mode:
Biological process: Multidrug resistance
Effector:
Phylum: Firmicutes
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Clostridium beijerincki NCIMB 8052
Position: -155
Score: 82.03
Sequence: TATTTAAGTTTTCTA...
Locus tag: Cbei_3447
Name: COG3382
Funciton: Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta
Locus tag: Cbei_3446
Name: COG731
Funciton: Putative Fe-S oxidoreductase
Locus tag: Cbei_3445
Name: ykkD
Funciton: Quaternary ammonium compound-resistance protein sugE
COG3382-COG731-ykkD -155 82 TATTTAAGTTTTCTA... Cbei_3447
Clostridium butyricum 5521
Position: -165
Score: 81.14
Sequence: AAGATAAGTTTTCTA...
Locus tag: CBY_1736
Name: COG731
Funciton: Putative Fe-S oxidoreductase
Locus tag: CBY_1735
Name: ykkD
Funciton: Quaternary ammonium compound-resistance protein sugE
COG731-ykkD -165 81.1 AAGATAAGTTTTCTA... CBY_1736
Clostridium cellulolyticum H10
Position: -161
Score: 81.47
Sequence: ATATAGTTTTATAGG...
Locus tag: Ccel_2446
Name: ykkD
Funciton: Quaternary ammonium compound-resistance protein sugE
ykkD -161 81.5 ATATAGTTTTATAGG... Ccel_2446
Clostridium difficile 630
Position: -175
Score: 84.61
Sequence: ATAGAGTTTTATAGG...
Locus tag: CD0488
Name: ykkD
Funciton: Quaternary ammonium compound-resistance protein sugE
ykkD -175 84.6 ATAGAGTTTTATAGG... CD0488
Clostridium kluyveri DSM 555
Position: -161
Score: 79.4
Sequence: ATTTAAAGTTTTATA...
Locus tag: CKL_2463
Name: ykkD
Funciton: Quaternary ammonium compound-resistance protein sugE
ykkD -161 79.4 ATTTAAAGTTTTATA... CKL_2463