Orthologous regulated operons containing COG0011 gene
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Phylum: | Firmicutes |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Clostridium acetobutylicum ATCC 824 | ||||
|
Position: -156
Score: 72.29 Sequence: TTTAGTGCTAGGGGT...
Locus tag: CAC1397
Name: COG0084 Funciton: TatD-related deoxyribonuclease, COG0084
Locus tag: CAC1398
Name: COG0011 Funciton: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family
Locus tag: CAC1399
Name: thiX Funciton: Thiamin ABC transporter, transmembrane component
Locus tag: CAC1400
Name: thiY Funciton: Thiamin ABC transporter, substrate-binding component
Locus tag: CAC1401
Name: thiZ Funciton: Thiamin ABC transporter, ATPase component |
||||
| COG0084-COG0011-thiX-thiY-thiZ | -156 | 72.3 | TTTAGTGCTAGGGGT... | CAC1397 |
| Clostridium bolteae ATCC BAA-613 | ||||
|
Position: -189
Score: 61.04 Sequence: ACAATGAAAAGGGGT...
Locus tag: CLOBOL_05155
Name: COG0011 Funciton: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family
Locus tag: CLOBOL_05156
Name: thiX Funciton: Thiamin ABC transporter, transmembrane component
Locus tag: CLOBOL_05157
Name: thiY Funciton: Thiamin ABC transporter, substrate-binding component
Locus tag: CLOBOL_05158
Name: thiZ Funciton: Thiamin ABC transporter, ATPase component |
||||
| COG0011-thiX-thiY-thiZ | -189 | 61 | ACAATGAAAAGGGGT... | CLOBOL_05155 |
| Clostridium botulinum A str. ATCC 3502 | ||||
|
Position: -191
Score: 75.69 Sequence: TATGTAAATGCAGGG...
Locus tag: CBO2913
Name: purF2 Funciton: Amidophosphoribosyltransferase (EC 2.4.2.14)
Locus tag: CBO2911
Name: thiC Funciton: Thiamine biosynthesis protein ThiC
Locus tag: CBO2910
Name: COG0011 Funciton: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family |
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| purF2-thiC-COG0011 | -191 | 75.7 | TATGTAAATGCAGGG... | CBO2913 |
| Clostridium leptum DSM 753 | ||||
|
Position: -199
Score: 59.95 Sequence: ATAGAATACCGGGGT...
Locus tag: CLOLEP_00999
Name: COG0011 Funciton: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family
Locus tag: CLOLEP_01000
Name: thiX Funciton: Thiamin ABC transporter, transmembrane component
Locus tag: CLOLEP_01001
Name: thiY Funciton: Thiamin ABC transporter, substrate-binding component
Locus tag: CLOLEP_01002
Name: thiZ Funciton: Thiamin ABC transporter, ATPase component |
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| COG0011-thiX-thiY-thiZ | -199 | 60 | ATAGAATACCGGGGT... | CLOLEP_00999 |
| Clostridium nexile DSM 1787 | ||||
|
Position: -226
Score: 67.07 Sequence: GAAAAGAAATCAGGG...
Locus tag: CLONEX_00344
Name: COG0011 Funciton: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family
Locus tag: CLONEX_00343
Name: thiX Funciton: Thiamin ABC transporter, transmembrane component |
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| COG0011-thiX | -226 | 67.1 | GAAAAGAAATCAGGG... | CLONEX_00344 |