Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing thiM gene

Properties
Regulator type: RNA regulatory element
Name: TPP
RFAM: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Phylum: Firmicutes
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Clostridium acetobutylicum ATCC 824
Position: -196
Score: 53.4
Sequence: TAATATTTTTCAGGG...
Locus tag: CAC3096
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: CAC3095
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiM-thiD -196 53.4 TAATATTTTTCAGGG... CAC3096
Clostridium bartlettii DSM 16795
Position: -297
Score: 64.4
Sequence: ATTAAAGTGCTAGGG...
Locus tag: CLOBAR_02041
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: CLOBAR_02040
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: CLOBAR_02039
Name: tenA
Funciton: Thiaminase II (EC 3.5.99.2)
Locus tag: CLOBAR_02038
Name: thiT
Funciton: Substrate-specific component ThiT of thiamin ECF transporter
Locus tag: CLOBAR_02037
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiD-thiM-tenA-thiT-thiE -297 64.4 ATTAAAGTGCTAGGG... CLOBAR_02041
Clostridium beijerincki NCIMB 8052
Position: -301
Score: 68.15
Sequence: ATTGAATAACTAGGG...
Locus tag: Cbei_4491
Name: thiW
Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter
Locus tag: Cbei_4490
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: Cbei_4489
Name: thiC
Funciton: Thiamine biosynthesis protein ThiC
Locus tag: Cbei_4488
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: Cbei_4487
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiW-thiD-thiC-thiM-thiE -301 68.2 ATTGAATAACTAGGG... Cbei_4491
Clostridium bolteae ATCC BAA-613
Position: -118
Score: 60.62
Sequence: CTAAATGACAACAGG...
Locus tag: CLOBOL_04495
Name: thiW
Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter
Locus tag: CLOBOL_04494
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: CLOBOL_04493
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiW-thiM-thiE -118 60.6 CTAAATGACAACAGG... CLOBOL_04495
Clostridium botulinum A str. ATCC 3502
Position: -410
Score: 54.67
Sequence: AATTTTTCAAAAGGG...
Locus tag: CBO2254
Name: thiW
Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter
Locus tag: CBO2253
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
thiW-thiM -410 54.7 AATTTTTCAAAAGGG... CBO2254
Clostridium butyricum 5521
Position: -200
Score: 67.64
Sequence: TAGATAACTAGGGGA...
Locus tag: CBY_1699
Name: thiW
Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter
Locus tag: CBY_1700
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: CBY_1701
Name: thiC
Funciton: Thiamine biosynthesis protein ThiC
Locus tag: CBY_1702
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: CBY_1703
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiW-thiD-thiC-thiM-thiE -200 67.6 TAGATAACTAGGGGA... CBY_1699
Clostridium cellulolyticum H10
Position: -409
Score: 59.42
Sequence: GTACTAGTTGCGGGG...
Position: -216
Score: 58.84
Sequence: TAAAAATTTGTGGGG...
Locus tag: Ccel_1992
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: Ccel_1991
Name: thiC
Funciton: Thiamine biosynthesis protein ThiC
Locus tag: Ccel_1990
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: Ccel_1989
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiD-thiC-thiM-thiE -409 59.4 GTACTAGTTGCGGGG... Ccel_1992
-216 58.8 TAAAAATTTGTGGGG...
Clostridium difficile 630
Position: -191
Score: 66.85
Sequence: AAAATAGCTAGGGGA...
Locus tag: CD1599
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: CD1600
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: CD1601
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiD-thiM-thiE -191 66.8 AAAATAGCTAGGGGA... CD1599
Clostridium hiranonis DSM 13275
Position: -175
Score: 55.95
Sequence: AAAATCAAGCAGGGG...
Locus tag: CLOHIR_00634
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: CLOHIR_00635
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: CLOHIR_00636
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiM-thiE-thiD -175 56 AAAATCAAGCAGGGG... CLOHIR_00634
Clostridium kluyveri DSM 555
Position: -169
Score: 80.45
Sequence: AATAGTTTTGTGGGG...
Locus tag: CKL_2919
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: CKL_2918
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: CKL_2917
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiD-thiM-thiE -169 80.4 AATAGTTTTGTGGGG... CKL_2919
Clostridium nexile DSM 1787
Position: -166
Score: 66.31
Sequence: CAAAAACATAGGGGA...
Locus tag: CLONEX_00816
Name: thiW
Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter
Locus tag: CLONEX_00817
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: CLONEX_00818
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: CLONEX_00819
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: CLONEX_00820
Name: thiC
Funciton: Thiamine biosynthesis protein ThiC
thiW-thiM-thiE-thiD-thiC -166 66.3 CAAAAACATAGGGGA... CLONEX_00816
Clostridium novyi NT
Position: -275
Score: 77.16
Sequence: TTAAGTTGCAGGGGT...
Locus tag: NT01CX_0246
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: NT01CX_0247
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: NT01CX_0248
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiD-thiM-thiE -275 77.2 TTAAGTTGCAGGGGT... NT01CX_0246
Clostridium perfringens ATCC 13124
Position: -184
Score: 74.0
Sequence: AAAAAATAGCTAGGG...
Locus tag: CPF_1545
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: CPF_1544
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: CPF_1543
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiD-thiM-thiE -184 74 AAAAAATAGCTAGGG... CPF_1545
Clostridium sp. OhILAs
Position: -426
Score: 68.36
Sequence: AATGGAACACTGGGA...
Locus tag: Clos_2695
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: Clos_2694
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: Clos_2693
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiD-thiM-thiE -426 68.4 AATGGAACACTGGGA... Clos_2695
Clostridium tetani E88
Position: -203
Score: 70.66
Sequence: AATAAAGTTTCAGGG...
Locus tag: CTC01754
Name: thiW
Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter
Locus tag: CTC01753
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: CTC01752
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: CTC01751
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: CTC01750
Name: thiF
Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: CTC01749
Name: thiG
Funciton: Thiazole biosynthesis protein ThiG
Locus tag: CTC01748
Name: thiH
Funciton: Thiazole biosynthesis protein ThiH
Locus tag: CTC01746
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiW-thiD-thiM-thiE-thiF-thiG-thiH-thiE -203 70.7 AATAAAGTTTCAGGG... CTC01754
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