Orthologous regulated operons containing thiC gene
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Phylum: | Firmicutes |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Clostridium acetobutylicum ATCC 824 | ||||
|
Position: -242
Score: 55.94 Sequence: ATATTTTAGCTAGGG...
Locus tag: CAC3014
Name: thiC Funciton: Thiamine biosynthesis protein ThiC |
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| thiC | -242 | 55.9 | ATATTTTAGCTAGGG... | CAC3014 |
| Clostridium bartlettii DSM 16795 | ||||
|
Position: -291
Score: 48.61 Sequence: GAAATATATACAGGG...
Locus tag: CLOBAR_02453
Name: thiC Funciton: Thiamine biosynthesis protein ThiC |
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| thiC | -291 | 48.6 | GAAATATATACAGGG... | CLOBAR_02453 |
| Clostridium beijerincki NCIMB 8052 | ||||
|
Position: -301
Score: 68.15 Sequence: ATTGAATAACTAGGG...
Locus tag: Cbei_4491
Name: thiW Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter
Locus tag: Cbei_4490
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: Cbei_4489
Name: thiC Funciton: Thiamine biosynthesis protein ThiC
Locus tag: Cbei_4488
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: Cbei_4487
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
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| thiW-thiD-thiC-thiM-thiE | -301 | 68.2 | ATTGAATAACTAGGG... | Cbei_4491 |
| Clostridium botulinum A str. ATCC 3502 | ||||
|
Position: -191
Score: 75.69 Sequence: TATGTAAATGCAGGG...
Locus tag: CBO2913
Name: purF2 Funciton: Amidophosphoribosyltransferase (EC 2.4.2.14)
Locus tag: CBO2911
Name: thiC Funciton: Thiamine biosynthesis protein ThiC
Locus tag: CBO2910
Name: COG0011 Funciton: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family |
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| purF2-thiC-COG0011 | -191 | 75.7 | TATGTAAATGCAGGG... | CBO2913 |
| Clostridium butyricum 5521 | ||||
|
Position: -200
Score: 67.64 Sequence: TAGATAACTAGGGGA...
Locus tag: CBY_1699
Name: thiW Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter
Locus tag: CBY_1700
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: CBY_1701
Name: thiC Funciton: Thiamine biosynthesis protein ThiC
Locus tag: CBY_1702
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: CBY_1703
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
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| thiW-thiD-thiC-thiM-thiE | -200 | 67.6 | TAGATAACTAGGGGA... | CBY_1699 |
| Clostridium cellulolyticum H10 | ||||
|
Position: -409
Score: 59.42 Sequence: GTACTAGTTGCGGGG...
Position: -216
Score: 58.84 Sequence: TAAAAATTTGTGGGG...
Locus tag: Ccel_1992
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: Ccel_1991
Name: thiC Funciton: Thiamine biosynthesis protein ThiC
Locus tag: Ccel_1990
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: Ccel_1989
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
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| thiD-thiC-thiM-thiE | -409 | 59.4 | GTACTAGTTGCGGGG... | Ccel_1992 |
| -216 | 58.8 | TAAAAATTTGTGGGG... | ||
| Clostridium difficile 630 | ||||
|
Position: -252
Score: 70.78 Sequence: ATTAGAGCTAGGGGC...
Locus tag: CD1702
Name: thiC Funciton: Thiamine biosynthesis protein ThiC
Locus tag: CD1702A
Name: thiS Funciton: thiamine biosynthesis protein ThiS
Locus tag: CD1703
Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: CD1704
Name: thiG Funciton: Thiazole biosynthesis protein ThiG
Locus tag: CD1705
Name: thiH Funciton: Thiazole biosynthesis protein ThiH
Locus tag: CD1706
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
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| thiC-thiS-thiF-thiG-thiH-thiE | -252 | 70.8 | ATTAGAGCTAGGGGC... | CD1702 |
| Clostridium hiranonis DSM 13275 | ||||
|
Position: -275
Score: 57.48 Sequence: ATCGATGCTAGGGGC...
Locus tag: CLOHIR_00425
Name: thiC Funciton: Thiamine biosynthesis protein ThiC
Locus tag: CLOHIR_00426
Name: thiS Funciton: thiamine biosynthesis protein ThiS
Locus tag: CLOHIR_00427
Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: CLOHIR_00428
Name: thiG Funciton: Thiazole biosynthesis protein ThiG
Locus tag: CLOHIR_00429
Name: thiH Funciton: Thiazole biosynthesis protein ThiH
Locus tag: CLOHIR_00430
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
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| thiC-thiS-thiF-thiG-thiH-thiE | -275 | 57.5 | ATCGATGCTAGGGGC... | CLOHIR_00425 |
| Clostridium kluyveri DSM 555 | ||||
|
Position: -241
Score: 55.89 Sequence: ATATTATGTGCAGGG...
Locus tag: CKL_1776
Name: thiC Funciton: Thiamine biosynthesis protein ThiC |
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| thiC | -241 | 55.9 | ATATTATGTGCAGGG... | CKL_1776 |
| Clostridium nexile DSM 1787 | ||||
|
Position: -166
Score: 66.31 Sequence: CAAAAACATAGGGGA...
Locus tag: CLONEX_00816
Name: thiW Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter
Locus tag: CLONEX_00817
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: CLONEX_00818
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: CLONEX_00819
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: CLONEX_00820
Name: thiC Funciton: Thiamine biosynthesis protein ThiC |
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| thiW-thiM-thiE-thiD-thiC | -166 | 66.3 | CAAAAACATAGGGGA... | CLONEX_00816 |
| Clostridium novyi NT | ||||
|
Position: -202
Score: 62.89 Sequence: ATCGTTTGCGGGGGA...
Locus tag: NT01CX_0092
Name: thiC Funciton: Thiamine biosynthesis protein ThiC |
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| thiC | -202 | 62.9 | ATCGTTTGCGGGGGA... | NT01CX_0092 |
| Clostridium perfringens ATCC 13124 | ||||
|
Position: -253
Score: 78.81 Sequence: GTAAGTGCTAGGGGT...
Locus tag: CPF_0670
Name: thiC Funciton: Thiamine biosynthesis protein ThiC |
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| thiC | -253 | 78.8 | GTAAGTGCTAGGGGT... | CPF_0670 |
| Clostridium scindens ATCC 35704 | ||||
|
Position: -234
Score: 57.85 Sequence: AGGAACAACAGGGGT...
Locus tag: CLOSCI_03456
Name: thiC Funciton: Thiamine biosynthesis protein ThiC |
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| thiC | -234 | 57.8 | AGGAACAACAGGGGT... | CLOSCI_03456 |
| Clostridium sp. L2-50 | ||||
|
Position: -199
Score: 58.48 Sequence: TTATATATTCAGGGA...
Locus tag: CLOL250_01568
Name: thiC Funciton: Thiamine biosynthesis protein ThiC |
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| thiC | -199 | 58.5 | TTATATATTCAGGGA... | CLOL250_01568 |
| Clostridium sp. OhILAs | ||||
|
Position: -258
Score: 71.75 Sequence: TAAGTTAGAAGGGGA...
Locus tag: Clos_0766
Name: thiC Funciton: Thiamine biosynthesis protein ThiC
Locus tag: Clos_0767
Name: thiW Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter |
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| thiC-thiW | -258 | 71.8 | TAAGTTAGAAGGGGA... | Clos_0766 |
| Clostridium sp. SS2/1 | ||||
|
Position: -246
Score: 59.87 Sequence: GTAACTGAAATGGGA...
Locus tag: CLOSS21_02770
Name: thiC Funciton: Thiamine biosynthesis protein ThiC |
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| thiC | -246 | 59.9 | GTAACTGAAATGGGA... | CLOSS21_02770 |
| Clostridium tetani E88 | ||||
|
Position: -204
Score: 73.8 Sequence: AATAAATTTAGGGGA...
Locus tag: CTC00828
Name: thiC Funciton: Thiamine biosynthesis protein ThiC |
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| thiC | -204 | 73.8 | AATAAATTTAGGGGA... | CTC00828 |