Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing thiC gene

Properties
Regulator type: RNA regulatory element
Name: TPP
RFAM: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Phylum: Firmicutes
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Clostridium acetobutylicum ATCC 824
Position: -242
Score: 55.94
Sequence: ATATTTTAGCTAGGG...
Locus tag: CAC3014
Name: thiC
Funciton: Thiamine biosynthesis protein ThiC
thiC -242 55.9 ATATTTTAGCTAGGG... CAC3014
Clostridium bartlettii DSM 16795
Position: -291
Score: 48.61
Sequence: GAAATATATACAGGG...
Locus tag: CLOBAR_02453
Name: thiC
Funciton: Thiamine biosynthesis protein ThiC
thiC -291 48.6 GAAATATATACAGGG... CLOBAR_02453
Clostridium beijerincki NCIMB 8052
Position: -301
Score: 68.15
Sequence: ATTGAATAACTAGGG...
Locus tag: Cbei_4491
Name: thiW
Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter
Locus tag: Cbei_4490
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: Cbei_4489
Name: thiC
Funciton: Thiamine biosynthesis protein ThiC
Locus tag: Cbei_4488
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: Cbei_4487
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiW-thiD-thiC-thiM-thiE -301 68.2 ATTGAATAACTAGGG... Cbei_4491
Clostridium botulinum A str. ATCC 3502
Position: -191
Score: 75.69
Sequence: TATGTAAATGCAGGG...
Locus tag: CBO2913
Name: purF2
Funciton: Amidophosphoribosyltransferase (EC 2.4.2.14)
Locus tag: CBO2911
Name: thiC
Funciton: Thiamine biosynthesis protein ThiC
Locus tag: CBO2910
Name: COG0011
Funciton: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family
purF2-thiC-COG0011 -191 75.7 TATGTAAATGCAGGG... CBO2913
Clostridium butyricum 5521
Position: -200
Score: 67.64
Sequence: TAGATAACTAGGGGA...
Locus tag: CBY_1699
Name: thiW
Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter
Locus tag: CBY_1700
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: CBY_1701
Name: thiC
Funciton: Thiamine biosynthesis protein ThiC
Locus tag: CBY_1702
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: CBY_1703
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiW-thiD-thiC-thiM-thiE -200 67.6 TAGATAACTAGGGGA... CBY_1699
Clostridium cellulolyticum H10
Position: -409
Score: 59.42
Sequence: GTACTAGTTGCGGGG...
Position: -216
Score: 58.84
Sequence: TAAAAATTTGTGGGG...
Locus tag: Ccel_1992
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: Ccel_1991
Name: thiC
Funciton: Thiamine biosynthesis protein ThiC
Locus tag: Ccel_1990
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: Ccel_1989
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiD-thiC-thiM-thiE -409 59.4 GTACTAGTTGCGGGG... Ccel_1992
-216 58.8 TAAAAATTTGTGGGG...
Clostridium difficile 630
Position: -252
Score: 70.78
Sequence: ATTAGAGCTAGGGGC...
Locus tag: CD1702
Name: thiC
Funciton: Thiamine biosynthesis protein ThiC
Locus tag: CD1702A
Name: thiS
Funciton: thiamine biosynthesis protein ThiS
Locus tag: CD1703
Name: thiF
Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: CD1704
Name: thiG
Funciton: Thiazole biosynthesis protein ThiG
Locus tag: CD1705
Name: thiH
Funciton: Thiazole biosynthesis protein ThiH
Locus tag: CD1706
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiC-thiS-thiF-thiG-thiH-thiE -252 70.8 ATTAGAGCTAGGGGC... CD1702
Clostridium hiranonis DSM 13275
Position: -275
Score: 57.48
Sequence: ATCGATGCTAGGGGC...
Locus tag: CLOHIR_00425
Name: thiC
Funciton: Thiamine biosynthesis protein ThiC
Locus tag: CLOHIR_00426
Name: thiS
Funciton: thiamine biosynthesis protein ThiS
Locus tag: CLOHIR_00427
Name: thiF
Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: CLOHIR_00428
Name: thiG
Funciton: Thiazole biosynthesis protein ThiG
Locus tag: CLOHIR_00429
Name: thiH
Funciton: Thiazole biosynthesis protein ThiH
Locus tag: CLOHIR_00430
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiC-thiS-thiF-thiG-thiH-thiE -275 57.5 ATCGATGCTAGGGGC... CLOHIR_00425
Clostridium kluyveri DSM 555
Position: -241
Score: 55.89
Sequence: ATATTATGTGCAGGG...
Locus tag: CKL_1776
Name: thiC
Funciton: Thiamine biosynthesis protein ThiC
thiC -241 55.9 ATATTATGTGCAGGG... CKL_1776
Clostridium nexile DSM 1787
Position: -166
Score: 66.31
Sequence: CAAAAACATAGGGGA...
Locus tag: CLONEX_00816
Name: thiW
Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter
Locus tag: CLONEX_00817
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: CLONEX_00818
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: CLONEX_00819
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: CLONEX_00820
Name: thiC
Funciton: Thiamine biosynthesis protein ThiC
thiW-thiM-thiE-thiD-thiC -166 66.3 CAAAAACATAGGGGA... CLONEX_00816
Clostridium novyi NT
Position: -202
Score: 62.89
Sequence: ATCGTTTGCGGGGGA...
Locus tag: NT01CX_0092
Name: thiC
Funciton: Thiamine biosynthesis protein ThiC
thiC -202 62.9 ATCGTTTGCGGGGGA... NT01CX_0092
Clostridium perfringens ATCC 13124
Position: -253
Score: 78.81
Sequence: GTAAGTGCTAGGGGT...
Locus tag: CPF_0670
Name: thiC
Funciton: Thiamine biosynthesis protein ThiC
thiC -253 78.8 GTAAGTGCTAGGGGT... CPF_0670
Clostridium scindens ATCC 35704
Position: -234
Score: 57.85
Sequence: AGGAACAACAGGGGT...
Locus tag: CLOSCI_03456
Name: thiC
Funciton: Thiamine biosynthesis protein ThiC
thiC -234 57.8 AGGAACAACAGGGGT... CLOSCI_03456
Clostridium sp. L2-50
Position: -199
Score: 58.48
Sequence: TTATATATTCAGGGA...
Locus tag: CLOL250_01568
Name: thiC
Funciton: Thiamine biosynthesis protein ThiC
thiC -199 58.5 TTATATATTCAGGGA... CLOL250_01568
Clostridium sp. OhILAs
Position: -258
Score: 71.75
Sequence: TAAGTTAGAAGGGGA...
Locus tag: Clos_0766
Name: thiC
Funciton: Thiamine biosynthesis protein ThiC
Locus tag: Clos_0767
Name: thiW
Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter
thiC-thiW -258 71.8 TAAGTTAGAAGGGGA... Clos_0766
Clostridium sp. SS2/1
Position: -246
Score: 59.87
Sequence: GTAACTGAAATGGGA...
Locus tag: CLOSS21_02770
Name: thiC
Funciton: Thiamine biosynthesis protein ThiC
thiC -246 59.9 GTAACTGAAATGGGA... CLOSS21_02770
Clostridium tetani E88
Position: -204
Score: 73.8
Sequence: AATAAATTTAGGGGA...
Locus tag: CTC00828
Name: thiC
Funciton: Thiamine biosynthesis protein ThiC
thiC -204 73.8 AATAAATTTAGGGGA... CTC00828
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