Orthologous regulated operons containing nrdB gene
| Regulog: | NrdR - Oceanospirillales/Alteromonadales |
| Regulator type: | Transcription factor |
| Regulator family: | NrdR |
| Regulation mode: | repressor |
| Biological process: | Deoxyribonucleotide biosynthesis |
| Effector: | Deoxyribonucleotides |
| Phylum: | Proteobacteria/gamma |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Alcanivorax borkumensis SK2 | ||||
|
Position: -442
Score: 5.4615 Sequence: ACACTATATCTAGTGT
Position: -297
Score: 4.67672 Sequence: CCCCAACATGTTGGGT
Position: -164
Score: 5.07965 Sequence: ACACAACATCTTGTGG
Locus tag: ABO_0711
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: ABO_0710
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
||||
| nrdA-nrdB | -442 | 5.5 | ACACTATATCTAGTGT | ABO_0711 |
| -297 | 4.7 | CCCCAACATGTTGGGT | ||
| -164 | 5.1 | ACACAACATCTTGTGG | ||
| Cellvibrio japonicus Ueda107 | ||||
|
Position: -487
Score: 3.60027 Sequence: CCGCATTATCTTGTAG
Position: -456
Score: 4.19034 Sequence: CCCCTAGATATAGGTT
Position: -255
Score: 5.2488 Sequence: CCACTATATCTAGTGG
Locus tag: CJA_1569
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: CJA_1568
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
||||
| nrdA-nrdB | -487 | 3.6 | CCGCATTATCTTGTAG | CJA_1569 |
| -456 | 4.2 | CCCCTAGATATAGGTT | ||
| -255 | 5.2 | CCACTATATCTAGTGG | ||
| Chromohalobacter salexigens DSM 3043 | ||||
|
Position: -206
Score: 3.33192 Sequence: CGGCTCTATCTTGTGC
Position: -175
Score: 4.98825 Sequence: CCCCCATATATAGGGA
Locus tag: Csal_0668
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Csal_0667
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
||||
| nrdA-nrdB | -206 | 3.3 | CGGCTCTATCTTGTGC | Csal_0668 |
| -175 | 5 | CCCCCATATATAGGGA | ||
| Hahella chejuensis KCTC 2396 | ||||
|
Position: -385
Score: 4.44349 Sequence: ACGCTACATCTAGTAT
Position: -353
Score: 4.62874 Sequence: AAACCATATATTGTGC
Locus tag: HCH_06929
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: HCH_06928
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
||||
| nrdA-nrdB | -385 | 4.4 | ACGCTACATCTAGTAT | HCH_06929 |
| -353 | 4.6 | AAACCATATATTGTGC | ||
| Marinobacter aqueolei | ||||
|
Position: -280
Score: 3.7129 Sequence: CGGCCCTATATAGTGA
Position: -248
Score: 4.91571 Sequence: CTACCATATATTGTGA
Locus tag: Maqu_3857
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Maqu_3856
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
||||
| nrdA-nrdB | -280 | 3.7 | CGGCCCTATATAGTGA | Maqu_3857 |
| -248 | 4.9 | CTACCATATATTGTGA | ||
| Marinobacter sp. ELB17 | ||||
|
Position: -415
Score: 3.9672 Sequence: TTCCCGTATATAGTGT
Position: -383
Score: 4.17024 Sequence: ATACCAGATGTAGTGA
Locus tag: MELB17_00905
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: MELB17_00910
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
||||
| nrdA-nrdB | -415 | 4 | TTCCCGTATATAGTGT | MELB17_00905 |
| -383 | 4.2 | ATACCAGATGTAGTGA | ||
| Marinomonas sp. MWYL1 | ||||
|
Position: -87
Score: 5.56938 Sequence: ACACTACATATAGTGT
Position: -55
Score: 4.63804 Sequence: ACACTACATACAGTAA
Locus tag: Mmwyl1_2996
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Mmwyl1_2997
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: Mmwyl1_2998
Name: yfaE Funciton: Ferredoxin |
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| nrdA-nrdB-yfaE | -87 | 5.6 | ACACTACATATAGTGT | Mmwyl1_2996 |
| -55 | 4.6 | ACACTACATACAGTAA | ||
| Oceanobacter sp. RED65 | ||||
|
Position: -202
Score: 5.15662 Sequence: ACACTATATATGGGGT
Position: -170
Score: 4.58808 Sequence: ACCCATTATCTTGTGT
Locus tag: RED65_10534
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: RED65_10539
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: RED65_10544
Name: yfaE Funciton: Ferredoxin |
||||
| nrdA-nrdB-yfaE | -202 | 5.2 | ACACTATATATGGGGT | RED65_10534 |
| -170 | 4.6 | ACCCATTATCTTGTGT | ||
| Oceanospirillum sp. MED92 | ||||
|
Position: -190
Score: 4.91869 Sequence: TCACTATATTTAGTGT
Position: -159
Score: 4.87923 Sequence: GTACTACATATAGTGT
Locus tag: MED92_15538
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: MED92_15533
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: MED92_15528
Name: yfaE Funciton: Ferredoxin |
||||
| nrdA-nrdB-yfaE | -190 | 4.9 | TCACTATATTTAGTGT | MED92_15538 |
| -159 | 4.9 | GTACTACATATAGTGT | ||
| Reinekea sp. MED297 | ||||
|
Position: -397
Score: 4.7928 Sequence: ACACAATATATGGTTT
Position: -366
Score: 4.86549 Sequence: GCCCTATATGTTGTGT
Locus tag: MED297_18987
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: MED297_18982
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
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| nrdA-nrdB | -397 | 4.8 | ACACAATATATGGTTT | MED297_18987 |
| -366 | 4.9 | GCCCTATATGTTGTGT | ||
| Saccharophagus degradans 2-40 | ||||
|
Position: -451
Score: 3.72806 Sequence: CCGCATTATCTTGTAT
Position: -420
Score: 4.97112 Sequence: CCCCCATATATGGTGT
Position: -188
Score: 5.42675 Sequence: CCACTATATATAGTGG
Locus tag: Sde_2458
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Sde_2459
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
||||
| nrdA-nrdB | -451 | 3.7 | CCGCATTATCTTGTAT | Sde_2458 |
| -420 | 5 | CCCCCATATATGGTGT | ||
| -188 | 5.4 | CCACTATATATAGTGG | ||
| Teredinibacter turnerae T7901 | ||||
|
Position: -292
Score: 3.72806 Sequence: CCGCATTATCTTGTAT
Position: -261
Score: 4.93832 Sequence: CCCCAATATATGGTGT
Locus tag: TERTU_0730
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: TERTU_0729
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
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| nrdA-nrdB | -292 | 3.7 | CCGCATTATCTTGTAT | TERTU_0730 |
| -261 | 4.9 | CCCCAATATATGGTGT | ||