Orthologous regulated operons containing msd gene
| Regulator type: | RNA regulatory element |
| Name: | SAM |
| RFAM: | RF00162 |
| Regulation mode: | |
| Biological process: | Methionine biosynthesis |
| Effector: | S-adenosylmethionine |
| Phylum: | Firmicutes |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Clostridium beijerincki NCIMB 8052 | ||||
|
Position: -266
Score: 92.68 Sequence: ACTTATCAAGAGTGG...
Locus tag: Cbei_1401
Name: msd Funciton: Methionine synthase activation domain (EC 2.1.1.13)
Locus tag: Cbei_1402
Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
||||
| msd-metH | -266 | 92.7 | ACTTATCAAGAGTGG... | Cbei_1401 |
| Clostridium botulinum A str. ATCC 3502 | ||||
|
Position: -225
Score: 95.99 Sequence: ACTTATCAAGAGAGG...
Locus tag: CBO1621
Name: metF Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
Locus tag: CBO1622
Name: msd Funciton: Methionine synthase activation domain (EC 2.1.1.13)
Locus tag: CBO1623
Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
||||
| metF-msd-metH | -225 | 96 | ACTTATCAAGAGAGG... | CBO1621 |
| Clostridium butyricum 5521 | ||||
|
Position: -289
Score: 91.18 Sequence: ACTTATCAAGAGTGG...
Locus tag: CBY_0038
Name: msd Funciton: Methionine synthase activation domain (EC 2.1.1.13)
Locus tag: CBY_0039
Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
||||
| msd-metH | -289 | 91.2 | ACTTATCAAGAGTGG... | CBY_0038 |
| Clostridium difficile 630 | ||||
|
Position: -183
Score: 33.29 Sequence: ATACTTATCAAGAGT...
Locus tag: CD3598
Name: rhc Funciton: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
Locus tag: CD3597
Name: msd Funciton: Methionine synthase activation domain (EC 2.1.1.13)
Locus tag: CD3596
Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
||||
| rhc-msd-metH | -183 | 33.3 | ATACTTATCAAGAGT... | CD3598 |
| Clostridium hiranonis DSM 13275 | ||||
|
Position: -167
Score: 20.71 Sequence: ACTTATCAAGAATCG...
Locus tag: CLOHIR_02203
Name: rhc Funciton: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
Locus tag: CLOHIR_02204
Name: msd Funciton: Methionine synthase activation domain (EC 2.1.1.13)
Locus tag: CLOHIR_02205
Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
||||
| rhc-msd-metH | -167 | 20.7 | ACTTATCAAGAATCG... | CLOHIR_02203 |
| Clostridium sp. OhILAs | ||||
|
Position: -450
Score: 93.43 Sequence: ACTTATCAAGAGAGG...
Position: -274
Score: 89.33 Sequence: TTTTATCGAGAGAGG...
Locus tag: Clos_0078
Name: metF Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
Locus tag: Clos_0079
Name: msd Funciton: Methionine synthase activation domain (EC 2.1.1.13)
Locus tag: Clos_0080
Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
||||
| metF-msd-metH | -450 | 93.4 | ACTTATCAAGAGAGG... | Clos_0078 |
| -274 | 89.3 | TTTTATCGAGAGAGG... | ||