Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing qrtT gene

Properties
Regulator type: RNA regulatory element
Name: PreQ1
RFAM: RF00522
Regulation mode:
Biological process: Queuosine biosynthesis
Effector: Pre-queuosine1
Phylum: Firmicutes
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Clostridium difficile 630
Position: -143
Score: 44.26
Sequence: CTGTACTTGTTCGAG...
Locus tag: CD1682
Name: iunH
Funciton: preQ1-regulated inosine-uridine nucleoside hydrolase (EC 3.2.2.1)
Locus tag: CD1683
Name: qrtT
Funciton: Substrate-specific component STY3230 of queuosine-regulated ECF transporter
iunH-qrtT -143 44.3 CTGTACTTGTTCGAG... CD1682
Clostridium hiranonis DSM 13275
Position: -145
Score: 39.35
Sequence: TGGGGCTTGTTCGAG...
Locus tag: CLOHIR_00398
Name: iunH
Funciton: preQ1-regulated inosine-uridine nucleoside hydrolase (EC 3.2.2.1)
Locus tag: CLOHIR_00399
Name: qrtT
Funciton: Substrate-specific component STY3230 of queuosine-regulated ECF transporter
iunH-qrtT -145 39.3 TGGGGCTTGTTCGAG... CLOHIR_00398
Clostridium nexile DSM 1787
Position: -87
Score: 49.69
Sequence: CTGGACTGGTTCGAA...
Locus tag: CLONEX_00551
Name: iunH
Funciton: preQ1-regulated inosine-uridine nucleoside hydrolase (EC 3.2.2.1)
Locus tag: CLONEX_00552
Name: qrtT
Funciton: Substrate-specific component STY3230 of queuosine-regulated ECF transporter
Locus tag: CLONEX_00553
Name: qrtT
Funciton: Substrate-specific component STY3230 of queuosine-regulated ECF transporter
iunH-qrtT-qrtT -87 49.7 CTGGACTGGTTCGAA... CLONEX_00551
Clostridium perfringens ATCC 13124
Position: -375
Score: 54.8
Sequence: TTTGGTAGAGGTTCG...
Locus tag: CPF_2260
Name: iunH
Funciton: preQ1-regulated inosine-uridine nucleoside hydrolase (EC 3.2.2.1)
Locus tag: CPF_2259
Name: qrtT
Funciton: Substrate-specific component STY3230 of queuosine-regulated ECF transporter
iunH-qrtT -375 54.8 TTTGGTAGAGGTTCG... CPF_2260