Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing queC gene

Properties
Regulator type: RNA regulatory element
Name: PreQ1
RFAM: RF00522
Regulation mode:
Biological process: Queuosine biosynthesis
Effector: Pre-queuosine1
Phylum: Firmicutes
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Clostridium acetobutylicum ATCC 824
Position: -124
Score: 18.4
Sequence: TAAGACAGTTCGCAA...
Locus tag: CAC3622
Name: COG1924
Funciton: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)
Locus tag: CAC3623
Name: COG1775
Funciton: Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB
Locus tag: CAC3624
Name: queD
Funciton: Queuosine biosynthesis QueD, PTPS-I
Locus tag: CAC3625
Name: queE
Funciton: Queuosine Biosynthesis QueE Radical SAM
Locus tag: CAC3626
Name: folE
Funciton: GTP cyclohydrolase I (EC 3.5.4.16) type 1
Locus tag: CAC3627
Name: queC
Funciton: Queuosine Biosynthesis QueC ATPase
COG1924-COG1775-queD-queE-folE-queC -124 18.4 TAAGACAGTTCGCAA... CAC3622
Clostridium beijerincki NCIMB 8052
Position: -207
Score: 18.96
Sequence: TACGGACAGTTCATT...
Locus tag: Cbei_2538
Name: queD
Funciton: Queuosine biosynthesis QueD, PTPS-I
Locus tag: Cbei_2539
Name: queE
Funciton: Queuosine Biosynthesis QueE Radical SAM
Locus tag: Cbei_2540
Name: folE
Funciton: GTP cyclohydrolase I (EC 3.5.4.16) type 1
Locus tag: Cbei_2541
Name: queC
Funciton: Queuosine Biosynthesis QueC ATPase
Locus tag: Cbei_2542
Name: queF
Funciton: NADPH dependent preQ0 reductase
queD-queE-folE-queC-queF -207 19 TACGGACAGTTCATT... Cbei_2538
Clostridium botulinum A str. ATCC 3502
Position: -417
Score: 23.67
Sequence: TAAAGACAGTTCGTA...
Locus tag: CBO1552
Name: COG1924
Funciton: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)
Locus tag: CBO1553
Name: COG1775
Funciton: Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB
Locus tag: CBO1554
Name: queD
Funciton: Queuosine biosynthesis QueD, PTPS-I
Locus tag: CBO1555
Name: queE
Funciton: Queuosine Biosynthesis QueE Radical SAM
Locus tag: CBO1556
Name: folE
Funciton: GTP cyclohydrolase I (EC 3.5.4.16) type 1
Locus tag: CBO1557
Name: queC
Funciton: Queuosine Biosynthesis QueC ATPase
COG1924-COG1775-queD-queE-folE-queC -417 23.7 TAAAGACAGTTCGTA... CBO1552
Clostridium kluyveri DSM 555
Position: -138
Score: 25.86
Sequence: CAAGACAGTTCGTGA...
Locus tag: CKL_0422
Name: COG1924
Funciton: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)
Locus tag: CKL_0423
Name: COG1775
Funciton: Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB
Locus tag: CKL_0424
Name: queC
Funciton: Queuosine Biosynthesis QueC ATPase
Locus tag: CKL_0425
Name: queT
Funciton: Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter
COG1924-COG1775-queC-queT -138 25.9 CAAGACAGTTCGTGA... CKL_0422
Clostridium novyi NT
Position: -155
Score: 23.28
Sequence: TAAGACAGTTCGTAA...
Locus tag: NT01CX_2382
Name: COG1924
Funciton: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)
Locus tag: NT01CX_2383
Name: COG1775
Funciton: Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB
Locus tag: NT01CX_2384
Name: queD
Funciton: Queuosine biosynthesis QueD, PTPS-I
Locus tag: NT01CX_2385
Name: queE
Funciton: Queuosine Biosynthesis QueE Radical SAM
Locus tag: NT01CX_2386
Name: queC
Funciton: Queuosine Biosynthesis QueC ATPase
COG1924-COG1775-queD-queE-queC -155 23.3 TAAGACAGTTCGTAA... NT01CX_2382
Clostridium sp. L2-50
Position: -336
Score: 15.9
Sequence: TGACAGTTCATTAAT...
Locus tag: CLOL250_00654
Name: queD
Funciton: Queuosine biosynthesis QueD, PTPS-I
Locus tag: CLOL250_00655
Name: queE
Funciton: Queuosine Biosynthesis QueE Radical SAM
Locus tag: CLOL250_00656
Name: folE
Funciton: GTP cyclohydrolase I (EC 3.5.4.16) type 1
Locus tag: CLOL250_00657
Name: queC
Funciton: Queuosine Biosynthesis QueC ATPase
queD-queE-folE-queC -336 15.9 TGACAGTTCATTAAT... CLOL250_00654