Orthologous regulated operons containing queT gene
Regulator type: | RNA regulatory element |
Name: | PreQ1 |
RFAM: | RF00522 |
Regulation mode: | |
Biological process: | Queuosine biosynthesis |
Effector: | Pre-queuosine1 |
Phylum: | Firmicutes |
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Operon | Position | Score | Sequence | Locus Tag of the First Gene |
---|---|---|---|---|
Clostridium acetobutylicum ATCC 824 | ||||
Position: -57
Score: 24.52 Sequence: ATTTAAGACAGTTCG...
Locus tag: CAC2413
Name: queT Funciton: Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter |
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queT | -57 | 24.5 | ATTTAAGACAGTTCG... | CAC2413 |
Clostridium beijerincki NCIMB 8052 | ||||
Position: -272
Score: 17.58 Sequence: TATAGTCAGTTCGAA...
Locus tag: Cbei_0741
Name: queT Funciton: Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter |
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queT | -272 | 17.6 | TATAGTCAGTTCGAA... | Cbei_0741 |
Clostridium bolteae ATCC BAA-613 | ||||
Position: -57
Score: 19.79 Sequence: GACCGGTGTGTTCGA...
Locus tag: CLOBOL_02330
Name: queT Funciton: Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter |
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queT | -57 | 19.8 | GACCGGTGTGTTCGA... | CLOBOL_02330 |
Clostridium botulinum A str. ATCC 3502 | ||||
Position: -54
Score: 23.99 Sequence: TAATAGACAGTTCGT...
Locus tag: CBO3177
Name: queT Funciton: Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter |
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queT | -54 | 24 | TAATAGACAGTTCGT... | CBO3177 |
Clostridium butyricum 5521 | ||||
Position: -395
Score: 17.16 Sequence: ATTATAGTCAGTTCG...
Locus tag: CBY_1903
Name: queT Funciton: Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter |
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queT | -395 | 17.2 | ATTATAGTCAGTTCG... | CBY_1903 |
Clostridium cellulolyticum H10 | ||||
Position: -124
Score: 20.83 Sequence: AAAAGACAGTTCGTG...
Locus tag: Ccel_1404
Name: queT Funciton: Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter |
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queT | -124 | 20.8 | AAAAGACAGTTCGTG... | Ccel_1404 |
Clostridium kluyveri DSM 555 | ||||
Position: -138
Score: 25.86 Sequence: CAAGACAGTTCGTGA...
Locus tag: CKL_0422
Name: COG1924 Funciton: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)
Locus tag: CKL_0423
Name: COG1775 Funciton: Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB
Locus tag: CKL_0424
Name: queC Funciton: Queuosine Biosynthesis QueC ATPase
Locus tag: CKL_0425
Name: queT Funciton: Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter |
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COG1924-COG1775-queC-queT | -138 | 25.9 | CAAGACAGTTCGTGA... | CKL_0422 |
Clostridium nexile DSM 1787 | ||||
Position: -55
Score: 20.94 Sequence: AAAGAGTGTTCGCGA...
Locus tag: CLONEX_03575
Name: queT Funciton: Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter |
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queT | -55 | 20.9 | AAAGAGTGTTCGCGA... | CLONEX_03575 |
Clostridium novyi NT | ||||
Position: -278
Score: 24.37 Sequence: AAAGTAGACAGTTCG...
Locus tag: NT01CX_0338
Name: queT Funciton: Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter |
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queT | -278 | 24.4 | AAAGTAGACAGTTCG... | NT01CX_0338 |
Clostridium perfringens ATCC 13124 | ||||
Position: -254
Score: 17.82 Sequence: TATATAGACAGTTCG...
Locus tag: CPF_1749
Name: queT Funciton: Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter |
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queT | -254 | 17.8 | TATATAGACAGTTCG... | CPF_1749 |
Clostridium phytofermentans ISDg | ||||
Position: -55
Score: 19.29 Sequence: TTAAACCGTGTGTTC...
Locus tag: null
Name: queT Funciton: Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter |
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queT | -55 | 19.3 | TTAAACCGTGTGTTC... | null |
Clostridium scindens ATCC 35704 | ||||
Position: -57
Score: 22.46 Sequence: ATGAATCGTGTGTTC...
Locus tag: CLOSCI_01962
Name: queT Funciton: Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter |
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queT | -57 | 22.5 | ATGAATCGTGTGTTC... | CLOSCI_01962 |
Clostridium sp. OhILAs | ||||
Position: -52
Score: 24.49 Sequence: TTATGTCAGTTCGCA...
Locus tag: Clos_0047
Name: queT Funciton: Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter |
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queT | -52 | 24.5 | TTATGTCAGTTCGCA... | Clos_0047 |
Clostridium tetani E88 | ||||
Position: -52
Score: 26.09 Sequence: TATGGACAGTTCGTA...
Locus tag: CTC02339
Name: queT Funciton: Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter |
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queT | -52 | 26.1 | TATGGACAGTTCGTA... | CTC02339 |