Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rplJ gene

Properties
Regulator type: RNA regulatory element
Name: L10_leader
RFAM: RF00557
Regulation mode:
Biological process: Ribosome biogenesis
Effector:
Phylum: Firmicutes
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Clostridium acetobutylicum ATCC 824
Position: -168
Score: 59.8
Sequence: TATTAAATATGTAAA...
Locus tag: CAC3146
Name: rplJ
Funciton: LSU ribosomal protein L10p (P0)
Locus tag: CAC3145
Name: rplL
Funciton: LSU ribosomal protein L7/L12 (P1/P2)
rplJ-rplL -168 59.8 TATTAAATATGTAAA... CAC3146
Clostridium bartlettii DSM 16795
Position: -161
Score: 75.09
Sequence: AAAAACGAATAGATT...
Locus tag: CLOBAR_00085
Name: rplJ
Funciton: LSU ribosomal protein L10p (P0)
Locus tag: CLOBAR_00086
Name: rplL
Funciton: LSU ribosomal protein L7/L12 (P1/P2)
rplJ-rplL -161 75.1 AAAAACGAATAGATT... CLOBAR_00085
Clostridium beijerincki NCIMB 8052
Position: -158
Score: 72.37
Sequence: AAAAGAAAATATTTT...
Locus tag: Cbei_0142
Name: rplJ
Funciton: LSU ribosomal protein L10p (P0)
Locus tag: Cbei_0143
Name: rplL
Funciton: LSU ribosomal protein L7/L12 (P1/P2)
rplJ-rplL -158 72.4 AAAAGAAAATATTTT... Cbei_0142
Clostridium bolteae ATCC BAA-613
Position: -334
Score: 66.15
Sequence: ATACCACAGTATTGA...
Locus tag: CLOBOL_06829
Name: rplJ
Funciton: LSU ribosomal protein L10p (P0)
Locus tag: CLOBOL_06828
Name: rplL
Funciton: LSU ribosomal protein L7/L12 (P1/P2)
rplJ-rplL -334 66.2 ATACCACAGTATTGA... CLOBOL_06829
Clostridium botulinum A str. ATCC 3502
Position: -161
Score: 59.2
Sequence: TGTAAAAATGAATAT...
Locus tag: CBO3490
Name: rplJ
Funciton: LSU ribosomal protein L10p (P0)
Locus tag: CBO3489
Name: rplL
Funciton: LSU ribosomal protein L7/L12 (P1/P2)
rplJ-rplL -161 59.2 TGTAAAAATGAATAT... CBO3490
Clostridium cellulolyticum H10
Position: -193
Score: 50.98
Sequence: GGAAATTGAATATTG...
Locus tag: Ccel_0310
Name: rplJ
Funciton: LSU ribosomal protein L10p (P0)
Locus tag: Ccel_0311
Name: rplL
Funciton: LSU ribosomal protein L7/L12 (P1/P2)
rplJ-rplL -193 51 GGAAATTGAATATTG... Ccel_0310
Clostridium difficile 630
Position: -170
Score: 73.52
Sequence: AAAAAAGAATAGATT...
Locus tag: CD0063
Name: rplJ
Funciton: LSU ribosomal protein L10p (P0)
Locus tag: CD0064
Name: rplL
Funciton: LSU ribosomal protein L7/L12 (P1/P2)
rplJ-rplL -170 73.5 AAAAAAGAATAGATT... CD0063
Clostridium hiranonis DSM 13275
Position: -169
Score: 80.88
Sequence: AAAAAAGAATAGATT...
Locus tag: CLOHIR_01568
Name: rplJ
Funciton: LSU ribosomal protein L10p (P0)
Locus tag: CLOHIR_01569
Name: rplL
Funciton: LSU ribosomal protein L7/L12 (P1/P2)
rplJ-rplL -169 80.9 AAAAAAGAATAGATT... CLOHIR_01568
Clostridium kluyveri DSM 555
Position: -128
Score: 55.82
Sequence: TTGAATAAGTATATT...
Locus tag: CKL_0214
Name: rplJ
Funciton: LSU ribosomal protein L10p (P0)
Locus tag: CKL_0215
Name: rplL
Funciton: LSU ribosomal protein L7/L12 (P1/P2)
rplJ-rplL -128 55.8 TTGAATAAGTATATT... CKL_0214
Clostridium leptum DSM 753
Position: -129
Score: 64.85
Sequence: ATATTTGCTGATCTT...
Locus tag: CLOLEP_02935
Name: rplJ
Funciton: LSU ribosomal protein L10p (P0)
Locus tag: CLOLEP_02936
Name: rplL
Funciton: LSU ribosomal protein L7/L12 (P1/P2)
rplJ-rplL -129 64.8 ATATTTGCTGATCTT... CLOLEP_02935
Clostridium nexile DSM 1787
Position: -183
Score: 81.11
Sequence: AACTTATATTAGAAA...
Locus tag: CLONEX_01917
Name: rplJ
Funciton: LSU ribosomal protein L10p (P0)
Locus tag: CLONEX_01916
Name: rplL
Funciton: LSU ribosomal protein L7/L12 (P1/P2)
rplJ-rplL -183 81.1 AACTTATATTAGAAA... CLONEX_01917
Clostridium novyi NT
Position: -149
Score: 77.22
Sequence: TTAAATAAGATAATA...
Locus tag: NT01CX_1105
Name: rplJ
Funciton: LSU ribosomal protein L10p (P0)
Locus tag: NT01CX_1106
Name: rplL
Funciton: LSU ribosomal protein L7/L12 (P1/P2)
rplJ-rplL -149 77.2 TTAAATAAGATAATA... NT01CX_1105
Clostridium perfringens ATCC 13124
Position: -162
Score: 74.52
Sequence: AAAAAGTGAATGAAA...
Locus tag: CPF_2724
Name: rplJ
Funciton: LSU ribosomal protein L10p (P0)
Locus tag: CPF_2723
Name: rplL
Funciton: LSU ribosomal protein L7/L12 (P1/P2)
rplJ-rplL -162 74.5 AAAAAGTGAATGAAA... CPF_2724
Clostridium phytofermentans ISDg
Position: -180
Score: 84.54
Sequence: GCTTAATTCTCACAA...
Locus tag: null
Name: rplJ
Funciton: LSU ribosomal protein L10p (P0)
Locus tag: null
Name: rplL
Funciton: LSU ribosomal protein L7/L12 (P1/P2)
rplJ-rplL -180 84.5 GCTTAATTCTCACAA... null
Clostridium scindens ATCC 35704
Position: -189
Score: 73.24
Sequence: TAATATTTCACGATG...
Locus tag: CLOSCI_00863
Name: rplJ
Funciton: LSU ribosomal protein L10p (P0)
Locus tag: CLOSCI_00862
Name: rplL
Funciton: LSU ribosomal protein L7/L12 (P1/P2)
rplJ-rplL -189 73.2 TAATATTTCACGATG... CLOSCI_00863
Clostridium sp. L2-50
Position: -192
Score: 84.99
Sequence: TATCCCCCGATGAAC...
Locus tag: CLOL250_01641
Name: rplJ
Funciton: LSU ribosomal protein L10p (P0)
Locus tag: CLOL250_01642
Name: rplL
Funciton: LSU ribosomal protein L7/L12 (P1/P2)
rplJ-rplL -192 85 TATCCCCCGATGAAC... CLOL250_01641
Clostridium sp. OhILAs
Position: -183
Score: 50.12
Sequence: TAAAAATGAATATTT...
Locus tag: Clos_0482
Name: rplJ
Funciton: LSU ribosomal protein L10p (P0)
Locus tag: Clos_0483
Name: rplL
Funciton: LSU ribosomal protein L7/L12 (P1/P2)
rplJ-rplL -183 50.1 TAAAAATGAATATTT... Clos_0482
Clostridium sp. SS2/1
Position: -175
Score: 79.53
Sequence: TATGTAAAGTATTAC...
Locus tag: CLOSS21_02766
Name: rplJ
Funciton: LSU ribosomal protein L10p (P0)
Locus tag: CLOSS21_02767
Name: rplL
Funciton: LSU ribosomal protein L7/L12 (P1/P2)
rplJ-rplL -175 79.5 TATGTAAAGTATTAC... CLOSS21_02766
Clostridium tetani E88
Position: -172
Score: 70.45
Sequence: TAGAATTAAAGAAAA...
Locus tag: CTC02610
Name: rplJ
Funciton: LSU ribosomal protein L10p (P0)
rplJ -172 70.4 TAGAATTAAAGAAAA... CTC02610
© 2009-2020 RegPrecise