Orthologous regulated operons containing grdB gene

Properties
Regulator type:	RNA regulatory element
Name:	Glycine
RFAM:	RF00504
Regulation mode:
Biological process:	Glycine metabolism
Effector:	Glycine
Phylum:	Firmicutes

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Clostridium botulinum A str. ATCC 3502
Position: -239 Score: 20.82 Sequence: TATCCTTATAGGATA... Position: -159 Score: 38.94 Sequence: GACAAAACTCTGGAA... Locus tag: CBO1255 Name: grdX Funciton: putative glycine reductase complex component Locus tag: CBO1256 Name: grdE Funciton: Glycine reductase component B (EC 1.21.4.2) Locus tag: CBO1257 Name: grdB Funciton: Glycine reductase complex component B gamma subunit Locus tag: CBO1259 Name: trxB Funciton: Thioredoxin reductase (EC 1.8.1.9) Locus tag: CBO1260 Name: trxA Funciton: Thioredoxin Locus tag: CBO1261 Name: grdA Funciton: Glycine reductase complex protein A Locus tag: CBO1263 Name: grdC Funciton: Glycine reductase component C chain 1 Locus tag: CBO1264 Name: grdD Funciton: Glycine reductase component C chain 2
grdX-grdE-grdB-trxB-trxA-grdA-grdC-grdD	-239	20.8	TATCCTTATAGGATA...	CBO1255
	-159	38.9	GACAAAACTCTGGAA...
Clostridium hiranonis DSM 13275
Position: -185 Score: 33.99 Sequence: TGAAGCGTATAGGAG... Locus tag: CLOHIR_00161 Name: grdX Funciton: putative glycine reductase complex component Locus tag: CLOHIR_00162 Name: trxB Funciton: Thioredoxin reductase (EC 1.8.1.9) Locus tag: CLOHIR_00163 Name: trxA Funciton: Thioredoxin Locus tag: CLOHIR_00164 Name: grdE Funciton: Glycine reductase component B (EC 1.21.4.2) Locus tag: CLOHIR_00165 Name: grdA Funciton: Glycine reductase complex protein A Locus tag: CLOHIR_00166 Name: grdA Funciton: Glycine reductase complex protein A Locus tag: CLOHIR_00167 Name: grdB Funciton: Glycine reductase complex component B gamma subunit Locus tag: CLOHIR_00168 Name: grdB Funciton: Glycine reductase complex component B gamma subunit Locus tag: CLOHIR_00169 Name: grdC Funciton: Glycine reductase component C chain 1 Locus tag: CLOHIR_00170 Name: grdD Funciton: Glycine reductase component C chain 2
grdX-trxB-trxA-grdE-grdA-grdA-grdB-grdB-grdC-grdD	-185	34	TGAAGCGTATAGGAG...	CLOHIR_00161
Clostridium scindens ATCC 35704
Position: -205 Score: 58.51 Sequence: ATGATGTTTCTCAAG... Locus tag: CLOSCI_00776 Name: grdX Funciton: putative glycine reductase complex component Locus tag: CLOSCI_00775 Name: grdE Funciton: Glycine reductase component B (EC 1.21.4.2) Locus tag: CLOSCI_00774 Name: grdB Funciton: Glycine reductase complex component B gamma subunit Locus tag: CLOSCI_00773 Name: grdB Funciton: Glycine reductase complex component B gamma subunit Locus tag: CLOSCI_00772 Name: trxB Funciton: Thioredoxin reductase (EC 1.8.1.9) Locus tag: CLOSCI_00771 Name: trxA Funciton: Thioredoxin Locus tag: CLOSCI_00770 Name: grdA Funciton: Glycine reductase complex protein A Locus tag: CLOSCI_00769 Name: grdA Funciton: Glycine reductase complex protein A Locus tag: CLOSCI_00768 Name: grdC Funciton: Glycine reductase component C chain 1 Locus tag: CLOSCI_00767 Name: grdD Funciton: Glycine reductase component C chain 2
grdX-grdE-grdB-grdB-trxB-trxA-grdA-grdA-grdC-grdD	-205	58.5	ATGATGTTTCTCAAG...	CLOSCI_00776
Clostridium sp. OhILAs
Position: -298 Score: 52.62 Sequence: AGAAGAGTGCGGGAG... Position: -194 Score: 40.5 Sequence: GACGGTACTCTGAAA... Locus tag: Clos_0953 Name: grdX Funciton: putative glycine reductase complex component Locus tag: Clos_0954 Name: trxB Funciton: Thioredoxin reductase (EC 1.8.1.9) Locus tag: Clos_0955 Name: trxA Funciton: Thioredoxin Locus tag: Clos_0956 Name: grdE Funciton: Glycine reductase component B (EC 1.21.4.2) Locus tag: Clos_0957 Name: grdA Funciton: Glycine reductase complex protein A Locus tag: Clos_0958 Name: grdB Funciton: Glycine reductase complex component B gamma subunit Locus tag: Clos_0959 Name: grdC Funciton: Glycine reductase component C chain 1 Locus tag: Clos_0960 Name: grdD Funciton: Glycine reductase component C chain 2
grdX-trxB-trxA-grdE-grdA-grdB-grdC-grdD	-298	52.6	AGAAGAGTGCGGGAG...	Clos_0953
	-194	40.5	GACGGTACTCTGAAA...