Orthologous regulated operons containing ribH gene
| Regulator type: | RNA regulatory element |
| Name: | FMN |
| RFAM: | RF00050 |
| Regulation mode: | |
| Biological process: | Riboflavin biosynthesis |
| Effector: | Flavin mononucleotide |
| Phylum: | Firmicutes |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Clostridium acetobutylicum ATCC 824 | ||||
|
Position: -170
Score: 110.37 Sequence: ATGTTCTTCAGGGAT...
Locus tag: CAC0590
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: CAC0591
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: CAC0592
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: CAC0593
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
||||
| ribD-ribE-ribBA-ribH | -170 | 110.4 | ATGTTCTTCAGGGAT... | CAC0590 |
| Clostridium bartlettii DSM 16795 | ||||
|
Position: -253
Score: 120.74 Sequence: GATTATTCTTCGGGG...
Locus tag: CLOBAR_00909
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: CLOBAR_00908
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: CLOBAR_00907
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: CLOBAR_00906
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
||||
| ribD-ribE-ribBA-ribH | -253 | 120.7 | GATTATTCTTCGGGG... | CLOBAR_00909 |
| Clostridium beijerincki NCIMB 8052 | ||||
|
Position: -447
Score: 111.26 Sequence: GAAATCTTCGGGGTT...
Locus tag: Cbei_1224
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: Cbei_1225
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: Cbei_1226
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: Cbei_1227
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
||||
| ribD-ribE-ribBA-ribH | -447 | 111.3 | GAAATCTTCGGGGTT... | Cbei_1224 |
| Clostridium botulinum A str. ATCC 3502 | ||||
|
Position: -343
Score: 106.84 Sequence: ATGAATCCTTCAGGG...
Locus tag: CBO2866
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: CBO2865
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: CBO2864
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: CBO2863
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
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| ribD-ribE-ribBA-ribH | -343 | 106.8 | ATGAATCCTTCAGGG... | CBO2866 |
| Clostridium butyricum 5521 | ||||
|
Position: -423
Score: 112.25 Sequence: TATTAATCTTCAGGG...
Locus tag: CBY_0685
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: CBY_0684
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: CBY_0683
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: CBY_0682
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
||||
| ribD-ribE-ribBA-ribH | -423 | 112.2 | TATTAATCTTCAGGG... | CBY_0685 |
| Clostridium cellulolyticum H10 | ||||
|
Position: -206
Score: 102.34 Sequence: ATGACACTTCAGGGA...
Locus tag: Ccel_2006
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: Ccel_2005
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: Ccel_2004
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: Ccel_2003
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
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| ribD-ribE-ribBA-ribH | -206 | 102.3 | ATGACACTTCAGGGA... | Ccel_2006 |
| Clostridium difficile 630 | ||||
|
Position: -254
Score: 118.75 Sequence: ACTTAATCTTCGGGG...
Locus tag: CD1700
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: CD1699
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: CD1698
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: CD1697
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
||||
| ribD-ribE-ribBA-ribH | -254 | 118.8 | ACTTAATCTTCGGGG... | CD1700 |
| Clostridium hiranonis DSM 13275 | ||||
|
Position: -211
Score: 123.02 Sequence: ACTATCTTCAGGGCA...
Locus tag: CLOHIR_00483
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: CLOHIR_00484
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: CLOHIR_00485
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: CLOHIR_00486
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
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| ribD-ribE-ribBA-ribH | -211 | 123 | ACTATCTTCAGGGCA... | CLOHIR_00483 |
| Clostridium kluyveri DSM 555 | ||||
|
Position: -394
Score: 103.11 Sequence: AATATGCTTTCGGGG...
Locus tag: CKL_2169
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: CKL_2168
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: CKL_2167
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: CKL_2166
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
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| ribD-ribE-ribBA-ribH | -394 | 103.1 | AATATGCTTTCGGGG... | CKL_2169 |
| Clostridium novyi NT | ||||
|
Position: -387
Score: 113.43 Sequence: TTTAATCCTTCAGGG...
Locus tag: NT01CX_0715
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: NT01CX_0714
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: NT01CX_0713
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: NT01CX_0712
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
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| ribD-ribE-ribBA-ribH | -387 | 113.4 | TTTAATCCTTCAGGG... | NT01CX_0715 |
| Clostridium perfringens ATCC 13124 | ||||
|
Position: -465
Score: 122.32 Sequence: AAATTCTTCAGGGCA...
Locus tag: CPF_0546
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: CPF_0547
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: CPF_0548
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: CPF_0549
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
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| ribD-ribE-ribBA-ribH | -465 | 122.3 | AAATTCTTCAGGGCA... | CPF_0546 |
| Clostridium sp. L2-50 | ||||
|
Position: -457
Score: 105.81 Sequence: TTGAAGTCTTCAGGG...
Locus tag: CLOL250_02833
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: CLOL250_02832
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: CLOL250_02831
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
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| ribE-ribBA-ribH | -457 | 105.8 | TTGAAGTCTTCAGGG... | CLOL250_02833 |
| Clostridium sp. SS2/1 | ||||
|
Position: -336
Score: 117.47 Sequence: AACGTCTTCAGGGCA...
Locus tag: CLOSS21_03172
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: CLOSS21_03173
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: CLOSS21_03174
Name: ribA Funciton: GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: CLOSS21_03175
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
Locus tag: CLOSS21_03176
Name: fggY Funciton: Sugar (pentulose and hexulose) kinase, FGGY family |
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| ribD-ribE-ribA-ribH-fggY | -336 | 117.5 | AACGTCTTCAGGGCA... | CLOSS21_03172 |
| Clostridium tetani E88 | ||||
|
Position: -254
Score: 108.51 Sequence: ACATCCTTCAGGGTT...
Locus tag: CTC00671
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: CTC00672
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: CTC00673
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: CTC00674
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
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| ribD-ribE-ribBA-ribH | -254 | 108.5 | ACATCCTTCAGGGTT... | CTC00671 |