Orthologous regulated operons containing rhiL gene

Properties
Regulog:	CcpA - Bacillales
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:
Biological process:	Carbon catabolism
Effector:	HPr, phosphocarrier protein
Phylum:	Firmicutes

Built upon 559 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Bacillus halodurans C-125
Position: -33 Score: 4.85316 Sequence: ATGTAAGCACTTTCAA Locus tag: BH1117 Name: rhiL Funciton: Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein Locus tag: BH1118 Name: rhiF Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 1 Locus tag: BH1119 Name: rhiG Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 2 Locus tag: BH1120 Name: rhiN1 Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172) Locus tag: BH1121 Name: yesV Funciton: Putative integral inner membrane component
rhiL-rhiF-rhiG-rhiN1-yesV	-33	4.9	ATGTAAGCACTTTCAA	BH1117
Bacillus licheniformis DSM 13
Position: -37 Score: 4.46205 Sequence: GAGTAAGCGTTTACAA Position: -30 Score: 4.79269 Sequence: ATGTAAGCACTTACAA Locus tag: BLi01368 Name: rhiL Funciton: Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein Locus tag: BLi01369 Name: rhiF Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 1 Locus tag: BLi01370 Name: rhiG Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 2 Locus tag: BLi01371 Name: rhiN1 Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172) Locus tag: BLi01372 Name: rhgR Funciton: Transcriptional regulator of rhamnogalacturonan utilization, AraC family Locus tag: BLi01373 Name: yesT Funciton: Rhamnogalacturonan acetylesterase Locus tag: BLi01374 Name: yesU Funciton: Hypothetical protein Locus tag: BLi01375 Name: yesV Funciton: Putative integral inner membrane component Locus tag: BLi01376 Name: yesW Funciton: Predicted rhamnogalacturonan lyase in rhamnose utilization cluster Locus tag: BLi01377 Name: BLi01377 Funciton: Hypothetical protein Locus tag: BLi01378 Name: yesT Funciton: Rhamnogalacturonan acetylesterase Locus tag: BLi01379 Name: yesX Funciton: Predicted rhamnogalacturonan lyase in rhamnose utilization cluster Locus tag: BLi01380 Name: yghZ Funciton: Putative ion-channel protein Locus tag: BLi01381 Name: yesY Funciton: Possible rhamnogalacturan acetylesterase Locus tag: BLi01382 Name: yesZ Funciton: Beta-galactosidase (EC 3.2.1.23)
rhiL-rhiF-rhiG-rhiN1-rhgR-yesT-yesU-yesV-yesW-BLi01377-yesT-yesX-yghZ-yesY-yesZ	-37	4.5	GAGTAAGCGTTTACAA	BLi01368
	-30	4.8	ATGTAAGCACTTACAA
Bacillus subtilis subsp. subtilis str. 168
Position: -32 Score: 4.76486 Sequence: ATGTAAGCACTTACAT Position: -20 Score: 4.59725 Sequence: AAGTAAGCGCTTACAG Locus tag: BSU06970 Name: rhiL Funciton: Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein Locus tag: BSU06980 Name: rhiF Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 1 Locus tag: BSU06990 Name: rhiG Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 2 Locus tag: BSU07000 Name: rhiN1 Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172) Locus tag: BSU07010 Name: rhgR Funciton: Transcriptional regulator of rhamnogalacturonan utilization, AraC family Locus tag: BSU07020 Name: yesT Funciton: Rhamnogalacturonan acetylesterase Locus tag: BSU07030 Name: yesU Funciton: Hypothetical protein Locus tag: BSU07040 Name: yesV Funciton: Putative integral inner membrane component Locus tag: BSU07050 Name: yesW Funciton: Predicted rhamnogalacturonan lyase in rhamnose utilization cluster Locus tag: BSU07060 Name: yesX Funciton: Predicted rhamnogalacturonan lyase in rhamnose utilization cluster Locus tag: BSU07070 Name: yesY Funciton: Possible rhamnogalacturan acetylesterase Locus tag: BSU07080 Name: yesZ Funciton: Beta-galactosidase (EC 3.2.1.23)
rhiL-rhiF-rhiG-rhiN1-rhgR-yesT-yesU-yesV-yesW-yesX-yesY-yesZ	-32	4.8	ATGTAAGCACTTACAT	BSU06970
	-20	4.6	AAGTAAGCGCTTACAG
Paenibacillus sp. JDR-2
Position: -41 Score: 4.64634 Sequence: ATGTAAACACTTACAT Locus tag: Pjdr2_3535 Name: rhiL Funciton: Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein Locus tag: Pjdr2_3534 Name: rhiF Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 1 Locus tag: Pjdr2_3533 Name: rhiG Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 2
rhiL-rhiF-rhiG	-41	4.6	ATGTAAACACTTACAT	Pjdr2_3535