Orthologous regulated operons containing cobC gene

Properties
Regulator type:	RNA regulatory element
Name:	Cobalamin
RFAM:	RF00174
Regulation mode:
Biological process:	Cobalamin biosynthesis
Effector:	Adenosylcobalamin
Phylum:	Firmicutes

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Clostridium acetobutylicum ATCC 824
Position: -313 Score: 105.44 Sequence: TGCTACTAAAATTTG... Locus tag: CAC1365 Name: cbiM Funciton: Substrate-specific component CbiM of cobalt ECF transporter Locus tag: CAC1366 Name: cbiN Funciton: Additional substrate-specific component CbiN of cobalt ECF transporter Locus tag: CAC1367 Name: cbiQ Funciton: Transmembrane component CbiQ of energizing module of cobalt ECF transporter Locus tag: CAC1368 Name: cbiO Funciton: ATPase component CbiO of energizing module of cobalt ECF transporter Locus tag: CAC1369 Name: cobD Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) Locus tag: CAC1370 Name: cbiG Funciton: Cobalamin biosynthesis protein CbiG Locus tag: CAC1371 Name: pduX Funciton: Threonine kinase in B12 biosynthesis Locus tag: CAC1372 Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) Locus tag: CAC1373 Name: cbiK Funciton: Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3) Locus tag: CAC1374 Name: cbiP Funciton: Cobyric acid synthase Locus tag: CAC1375 Name: cbiA Funciton: Cobyrinic acid A,C-diamide synthase Locus tag: CAC1376 Name: cbiC Funciton: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2) Locus tag: CAC1377 Name: cbiD Funciton: Cobalt-precorrin-6 synthase, anaerobic Locus tag: CAC1378 Name: cbiT Funciton: Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-) Locus tag: CAC1379 Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130) Locus tag: CAC1380 Name: cbiF Funciton: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) Locus tag: CAC1381 Name: cbiJ Funciton: Cobalt-precorrin-6x reductase (EC 1.3.1.54) Locus tag: CAC1382 Name: cbiH Funciton: Cobalt-precorrin-3b C17-methyltransferase Locus tag: CAC1383 Name: cobU Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) Locus tag: CAC1384 Name: cobS Funciton: Cobalamin synthase Locus tag: CAC1385 Name: cobC Funciton: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
cbiM-cbiN-cbiQ-cbiO-cobD-cbiG-pduX-cobT-cbiK-cbiP-cbiA-cbiC-cbiD-cbiT-cbiL-cbiF-cbiJ-cbiH-cobU-cobS-cobC	-313	105.4	TGCTACTAAAATTTG...	CAC1365
Clostridium novyi NT
Position: -298 Score: 106.96 Sequence: AATTAAATAAGTCAT... Locus tag: NT01CX_2077 Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) Locus tag: NT01CX_2078 Name: cobU Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) Locus tag: NT01CX_2079 Name: cobS Funciton: Cobalamin synthase Locus tag: NT01CX_2080 Name: cobC Funciton: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) Locus tag: NT01CX_2081 Name: cbiP Funciton: Cobyric acid synthase Locus tag: NT01CX_2082 Name: cbiB Funciton: Adenosylcobinamide-phosphate synthase Locus tag: NT01CX_2083 Name: cobD Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) Locus tag: NT01CX_2084 Name: btuF Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF Locus tag: NT01CX_2085 Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC Locus tag: NT01CX_2086 Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
cobT-cobU-cobS-cobC-cbiP-cbiB-cobD-btuF-btuC-btuD	-298	107	AATTAAATAAGTCAT...	NT01CX_2077
Clostridium phytofermentans ISDg
Position: -429 Score: 95.93 Sequence: AAAATATAATGTAGA... Locus tag: null Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) Locus tag: null Name: cobU Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) Locus tag: null Name: cobS Funciton: Cobalamin synthase Locus tag: null Name: cobU2 Funciton: cobalamin biosynthesis protein CobU, putative, truncation Locus tag: null Name: cobC Funciton: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) Locus tag: null Name: cbiB Funciton: Adenosylcobinamide-phosphate synthase Locus tag: null Name: cobD Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) Locus tag: null Name: cbiP Funciton: Cobyric acid synthase Locus tag: null Name: btuR Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
cobT-cobU-cobS-cobU2-cobC-cbiB-cobD-cbiP-btuR	-429	95.9	AAAATATAATGTAGA...	null
Clostridium sp. OhILAs
Position: -319 Score: 118.45 Sequence: ACAAATTAAATAGTT... Locus tag: Clos_2212 Name: cbiB Funciton: Adenosylcobinamide-phosphate synthase Locus tag: Clos_2211 Name: cobD Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) Locus tag: Clos_2210 Name: cobU Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) Locus tag: Clos_2209 Name: cobS Funciton: Cobalamin synthase Locus tag: Clos_2208 Name: cobC Funciton: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) Locus tag: Clos_2207 Name: cblT Funciton: Substrate-specific component CblT of predicted B12-regulated ECF transporter for dimethylbenzimidazole Locus tag: Clos_2206 Name: cblS Funciton: Predicted alpha-ribazole-5-phosphate synthase CblS for cobalamin biosynthesis
cbiB-cobD-cobU-cobS-cobC-cblT-cblS	-319	118.4	ACAAATTAAATAGTT...	Clos_2212