Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ygbK gene

Properties
Regulog: Crp - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria/gamma
Built upon 2301 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Edwardsiella tarda EIB202
Position: -93
Score: 3.91809
Sequence: ATTTGTGAGGATAAACACGGTT
Locus tag: ETAE_1922
Name: ygbJ
Funciton: D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)
Locus tag: ETAE_1923
Name: ygbK
Funciton: hypothetical protein
ygbJ-ygbK -93 3.9 ATTTGTGAGGATAAACACGGTT ETAE_1922
Erwinia amylovora ATCC 49946
Position: -90
Score: 4.43596
Sequence: TGATGTGAAGTTTATCACTAAT
Locus tag: EAM_1106
Name: ygbJ
Funciton: D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)
Locus tag: EAM_1107
Name: ygbK
Funciton: hypothetical protein
ygbJ-ygbK -90 4.4 TGATGTGAAGTTTATCACTAAT EAM_1106
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -92
Score: 4.54582
Sequence: TTATGTGATAAAAATCACCACA
Locus tag: ECA4327
Name: ygbJ
Funciton: D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)
Locus tag: ECA4328
Name: ygbK
Funciton: hypothetical protein
ygbJ-ygbK -92 4.5 TTATGTGATAAAAATCACCACA ECA4327
Escherichia coli str. K-12 substr. MG1655
Position: -90
Score: 4.87188
Sequence: TTATGTGAATCAGATCACCATA
Locus tag: b2736
Name: ygbJ
Funciton: D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)
Locus tag: b2737
Name: ygbK
Funciton: hypothetical protein
ygbJ-ygbK -90 4.9 TTATGTGAATCAGATCACCATA b2736
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -91
Score: 4.98444
Sequence: ATTCGTGATAACTCTCACATAT
Locus tag: KPN_01605
Name: ygbJ
Funciton: D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)
Locus tag: KPN_01604
Name: ygbK
Funciton: hypothetical protein
ygbJ-ygbK -91 5 ATTCGTGATAACTCTCACATAT KPN_01605
Photorhabdus luminescens subsp. laumondii TTO1
Position: -147
Score: 3.80238
Sequence: ATAAATAATATAAATCAAATAA
Position: -90
Score: 3.6756
Sequence: GAATGTGATAACCATCGTGTAT
Locus tag: plu2507
Name: ygbJ
Funciton: D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)
Locus tag: plu2508
Name: ygbK
Funciton: hypothetical protein
ygbJ-ygbK -147 3.8 ATAAATAATATAAATCAAATAA plu2507
-90 3.7 GAATGTGATAACCATCGTGTAT
Salmonella typhimurium LT2
Position: -90
Score: 3.99099
Sequence: TTTTGTGAAACAACTCACCGCA
Locus tag: STM2918
Name: ygbJ
Funciton: D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)
Locus tag: STM2917
Name: ygbK
Funciton: hypothetical protein
ygbJ-ygbK -90 4 TTTTGTGAAACAACTCACCGCA STM2918
Serratia proteamaculans 568
Position: -92
Score: 4.07223
Sequence: AATTGTGACAACGATCGCTGAT
Locus tag: Spro_1492
Name: ygbJ
Funciton: D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)
Locus tag: Spro_1491
Name: ygbK
Funciton: hypothetical protein
ygbJ-ygbK -92 4.1 AATTGTGACAACGATCGCTGAT Spro_1492
Yersinia pestis KIM
Position: -73
Score: 3.85303
Sequence: ATTTGTGATAACAGTCATCTCA
Locus tag: y2952
Name: ygbK
Funciton: hypothetical protein
ygbK -73 3.9 ATTTGTGATAACAGTCATCTCA y2952
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