Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ygbI gene

Properties
Regulog: Crp - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria/gamma
Built upon 2301 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Edwardsiella tarda EIB202
Position: -132
Score: 3.89548
Sequence: AACCGTGTTTATCCTCACAAAT
Locus tag: ETAE_1921
Name: ygbI
Funciton: Hypothetical transcriptional regulator ygbI
ygbI -132 3.9 AACCGTGTTTATCCTCACAAAT ETAE_1921
Erwinia amylovora ATCC 49946
Position: -238
Score: 4.53089
Sequence: ATTAGTGATAAACTTCACATCA
Locus tag: EAM_1104
Name: ygbI
Funciton: Hypothetical transcriptional regulator ygbI
ygbI -238 4.5 ATTAGTGATAAACTTCACATCA EAM_1104
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -267
Score: 4.77738
Sequence: TGTGGTGATTTTTATCACATAA
Locus tag: ECA4325
Name: ygbI
Funciton: Hypothetical transcriptional regulator ygbI
ygbI -267 4.8 TGTGGTGATTTTTATCACATAA ECA4325
Escherichia coli str. K-12 substr. MG1655
Position: -166
Score: 3.701
Sequence: TTGTTTGATATTGTGAATATAA
Position: -127
Score: 5.15603
Sequence: TATGGTGATCTGATTCACATAA
Locus tag: b2735
Name: ygbI
Funciton: Hypothetical transcriptional regulator ygbI
ygbI -166 3.7 TTGTTTGATATTGTGAATATAA b2735
-127 5.2 TATGGTGATCTGATTCACATAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -271
Score: 3.63536
Sequence: TAATGTGATTTAATGATAGAAT
Position: -230
Score: 4.70076
Sequence: ATATGTGAGAGTTATCACGAAT
Locus tag: KPN_01606
Name: ygbI
Funciton: Hypothetical transcriptional regulator ygbI
ygbI -271 3.6 TAATGTGATTTAATGATAGAAT KPN_01606
-230 4.7 ATATGTGAGAGTTATCACGAAT
Salmonella typhimurium LT2
Position: -128
Score: 3.96488
Sequence: TGCGGTGAGTTGTTTCACAAAA
Position: -87
Score: 3.59437
Sequence: TTTTGTGAAGGCAATCCTCATA
Locus tag: STM2919
Name: ygbI
Funciton: Hypothetical transcriptional regulator ygbI
ygbI -128 4 TGCGGTGAGTTGTTTCACAAAA STM2919
-87 3.6 TTTTGTGAAGGCAATCCTCATA
Serratia proteamaculans 568
Position: -211
Score: 3.92085
Sequence: ATCAGCGATCGTTGTCACAATT
Locus tag: Spro_1493
Name: ygbI
Funciton: Hypothetical transcriptional regulator ygbI
ygbI -211 3.9 ATCAGCGATCGTTGTCACAATT Spro_1493
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