Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing raiA gene

Properties
Regulog: Crp - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria/gamma
Built upon 2301 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -40
Score: 5.21819
Sequence: TAATGTGATTTAAATCACGCTT
Locus tag: CKO_03918
Name: raiA
Funciton: stationary phase translation inhibitor and ribosome stability factor
raiA -40 5.2 TAATGTGATTTAAATCACGCTT CKO_03918
Edwardsiella tarda EIB202
Position: -82
Score: 3.81583
Sequence: ATCCGTGATTTTCCTCTCACAC
Locus tag: ETAE_2834
Name: raiA
Funciton: stationary phase translation inhibitor and ribosome stability factor
raiA -82 3.8 ATCCGTGATTTTCCTCTCACAC ETAE_2834
Enterobacter sp. 638
Position: -81
Score: 5.4274
Sequence: ATGTGTGATTTAGATCACACAT
Locus tag: Ent638_3076
Name: raiA
Funciton: stationary phase translation inhibitor and ribosome stability factor
raiA -81 5.4 ATGTGTGATTTAGATCACACAT Ent638_3076
Erwinia amylovora ATCC 49946
Position: -83
Score: 5.19967
Sequence: AAATGTGATTTCAATCACGATT
Locus tag: EAM_2617
Name: raiA
Funciton: stationary phase translation inhibitor and ribosome stability factor
raiA -83 5.2 AAATGTGATTTCAATCACGATT EAM_2617
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -86
Score: 4.01035
Sequence: AAAAGCGATCAATCTCACGCTT
Locus tag: ECA3349
Name: raiA
Funciton: stationary phase translation inhibitor and ribosome stability factor
raiA -86 4 AAAAGCGATCAATCTCACGCTT ECA3349
Escherichia coli str. K-12 substr. MG1655
Position: -81
Score: 4.77612
Sequence: TTATGAGATTTTCATCACACAT
Locus tag: b2597
Name: raiA
Funciton: stationary phase translation inhibitor and ribosome stability factor
raiA -81 4.8 TTATGAGATTTTCATCACACAT b2597
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -88
Score: 5.60893
Sequence: AAATGTGATTTATATCACACAT
Locus tag: KPN_02919
Name: raiA
Funciton: stationary phase translation inhibitor and ribosome stability factor
raiA -88 5.6 AAATGTGATTTATATCACACAT KPN_02919
Photorhabdus luminescens subsp. laumondii TTO1
Position: -87
Score: 5.10079
Sequence: AATAGTGATTTAGATCACCTTT
Locus tag: plu1266
Name: raiA
Funciton: stationary phase translation inhibitor and ribosome stability factor
raiA -87 5.1 AATAGTGATTTAGATCACCTTT plu1266
Proteus mirabilis HI4320
Position: -82
Score: 4.62248
Sequence: AAAAGTGATCTTGATCATGTTT
Locus tag: PMI0391
Name: raiA
Funciton: stationary phase translation inhibitor and ribosome stability factor
raiA -82 4.6 AAAAGTGATCTTGATCATGTTT PMI0391
Serratia proteamaculans 568
Position: -83
Score: 4.75144
Sequence: ATACGTGATTTTCATCACGCAT
Locus tag: Spro_0882
Name: raiA
Funciton: stationary phase translation inhibitor and ribosome stability factor
raiA -83 4.8 ATACGTGATTTTCATCACGCAT Spro_0882
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