Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ycfR gene

Properties
Regulog: Crp - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria/gamma
Built upon 2301 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -113
Score: 3.81332
Sequence: TATAATGATCGTTATAAAAAAA
Position: -86
Score: 4.48376
Sequence: ACGTGTGACCTGGATCACATCT
Locus tag: CKO_01942
Name: ycfR
Funciton: hypothetical protein
ycfR -113 3.8 TATAATGATCGTTATAAAAAAA CKO_01942
-86 4.5 ACGTGTGACCTGGATCACATCT
Enterobacter sp. 638
Position: -91
Score: 4.66023
Sequence: ACGTGTGATGCAGATCACATCT
Locus tag: Ent638_1627
Name: ycfR
Funciton: hypothetical protein
ycfR -91 4.7 ACGTGTGATGCAGATCACATCT Ent638_1627
Escherichia coli str. K-12 substr. MG1655
Position: -114
Score: 3.68302
Sequence: ATTAATGATTGTTATAAAAAAT
Position: -87
Score: 4.77651
Sequence: GTATGTGATCCAGATCACATCT
Locus tag: b1112
Name: ycfR
Funciton: hypothetical protein
ycfR -114 3.7 ATTAATGATTGTTATAAAAAAT b1112
-87 4.8 GTATGTGATCCAGATCACATCT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -95
Score: 4.8601
Sequence: ACGTGTGACATAGATCACATTA
Locus tag: KPN_01110
Name: ycfR
Funciton: hypothetical protein
ycfR -95 4.9 ACGTGTGACATAGATCACATTA KPN_01110
Salmonella typhimurium LT2
Position: -88
Score: 4.74937
Sequence: ACGTGTGATGTAGATCACATCT
Locus tag: STM1214
Name: ycfR
Funciton: hypothetical protein
ycfR -88 4.7 ACGTGTGATGTAGATCACATCT STM1214
Serratia proteamaculans 568
Position: -116
Score: 3.69706
Sequence: TTATTTGATAAAGATTATCAAA
Locus tag: Spro_4435
Name: ycfR
Funciton: hypothetical protein
ycfR -116 3.7 TTATTTGATAAAGATTATCAAA Spro_4435
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