Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ycdZ gene

Properties
Regulog: Crp - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria/gamma
Built upon 2301 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -40
Score: 3.88467
Sequence: AAATGTGTGCGTGATCTCATTC
Locus tag: CKO_02033
Name: ycdZ
Funciton: hypothetical protein
ycdZ -40 3.9 AAATGTGTGCGTGATCTCATTC CKO_02033
Edwardsiella tarda EIB202
Position: -124
Score: 4.34198
Sequence: AAGTGTGATTGATGTCACTTTG
Position: -72
Score: 3.63474
Sequence: CGGTGTGATGTCCATCAATGAA
Locus tag: ETAE_2360
Name: ycdZ
Funciton: hypothetical protein
ycdZ -124 4.3 AAGTGTGATTGATGTCACTTTG ETAE_2360
-72 3.6 CGGTGTGATGTCCATCAATGAA
Escherichia coli str. K-12 substr. MG1655
Position: -52
Score: 4.02173
Sequence: AAATGTGTGCTCGATCTCATTC
Position: -50
Score: 3.68764
Sequence: ATGTGTGCTCGATCTCATTCAT
Locus tag: b1036
Name: ycdZ
Funciton: hypothetical protein
ycdZ -52 4 AAATGTGTGCTCGATCTCATTC b1036
-50 3.7 ATGTGTGCTCGATCTCATTCAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -52
Score: 4.12887
Sequence: TACTGTGTTTTAGATCGCATTC
Locus tag: KPN_01059
Name: ycdZ
Funciton: hypothetical protein
ycdZ -52 4.1 TACTGTGTTTTAGATCGCATTC KPN_01059
Proteus mirabilis HI4320
Position: -240
Score: 3.66713
Sequence: ATTAATAATATATATCAAACAA
Locus tag: PMI3124
Name: ycdZ
Funciton: hypothetical protein
ycdZ -240 3.7 ATTAATAATATATATCAAACAA PMI3124
Serratia proteamaculans 568
Position: -125
Score: 4.23416
Sequence: TTTTGTGACAAATTCCACATCT
Position: -96
Score: 3.64983
Sequence: TATCTTGTTTCTCATTACATAT
Position: -73
Score: 4.57653
Sequence: TTATGTGAAATACATCACATGA
Locus tag: Spro_3290
Name: ycdZ
Funciton: hypothetical protein
ycdZ -125 4.2 TTTTGTGACAAATTCCACATCT Spro_3290
-96 3.6 TATCTTGTTTCTCATTACATAT
-73 4.6 TTATGTGAAATACATCACATGA
© 2009-2020 RegPrecise