Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rhaS gene

Properties
Regulog: Crp - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria/gamma
Built upon 2301 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -194
Score: 4.53812
Sequence: GAACGTGATAGCGTTCACAATT
Position: -34
Score: 4.25332
Sequence: ATTTCTGACATGTTTCTCATAT
Locus tag: CKO_03099
Name: rhaS
Funciton: L-rhamnose operon regulatory protein RhaS
rhaS -194 4.5 GAACGTGATAGCGTTCACAATT CKO_03099
-34 4.3 ATTTCTGACATGTTTCTCATAT
Enterobacter sp. 638
Position: -194
Score: 4.16603
Sequence: GAACGTGAGGGAGTTCACAGTT
Locus tag: Ent638_4066
Name: rhaS
Funciton: L-rhamnose operon regulatory protein RhaS
Locus tag: Ent638_4065
Name: rhaR
Funciton: L-rhamnose operon transcriptional activator RhaR
rhaS-rhaR -194 4.2 GAACGTGAGGGAGTTCACAGTT Ent638_4066
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -144
Score: 3.89066
Sequence: CGGTGTGATCCTTGCCACACTT
Locus tag: ECA0441
Name: rhaS
Funciton: L-rhamnose operon regulatory protein RhaS
Locus tag: ECA0442
Name: rhaR
Funciton: L-rhamnose operon transcriptional activator RhaR
rhaS-rhaR -144 3.9 CGGTGTGATCCTTGCCACACTT ECA0441
Escherichia coli str. K-12 substr. MG1655
Position: -182
Score: 4.53866
Sequence: GAACGTGATGATGTTCACAATT
Position: -147
Score: 4.49616
Sequence: TGATGTGATGCTCACCGCATTT
Locus tag: b3905
Name: rhaS
Funciton: L-rhamnose operon regulatory protein RhaS
Locus tag: b3906
Name: rhaR
Funciton: L-rhamnose operon transcriptional activator RhaR
rhaS-rhaR -182 4.5 GAACGTGATGATGTTCACAATT b3905
-147 4.5 TGATGTGATGCTCACCGCATTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -204
Score: 3.76312
Sequence: GACCGTGAGGGACATCACAGTT
Locus tag: KPN_04214
Name: rhaS
Funciton: L-rhamnose operon regulatory protein RhaS
Locus tag: KPN_04215
Name: rhaR
Funciton: L-rhamnose operon transcriptional activator RhaR
rhaS-rhaR -204 3.8 GACCGTGAGGGACATCACAGTT KPN_04214
Salmonella typhimurium LT2
Position: -182
Score: 4.31786
Sequence: GAACGTGATAGCGTTCACAGTT
Position: -147
Score: 4.01752
Sequence: CGGTGTGATGTCGTCCGCATTT
Position: -62
Score: 3.79838
Sequence: TAAGGTGAGGCCGATAACCCTT
Locus tag: STM4048
Name: rhaS
Funciton: L-rhamnose operon regulatory protein RhaS
Locus tag: STM4049
Name: rhaR
Funciton: L-rhamnose operon transcriptional activator RhaR
rhaS-rhaR -182 4.3 GAACGTGATAGCGTTCACAGTT STM4048
-147 4 CGGTGTGATGTCGTCCGCATTT
-62 3.8 TAAGGTGAGGCCGATAACCCTT
Yersinia pestis KIM
Position: -214
Score: 3.93856
Sequence: GAAAGTGAAACAGCTCACAGTT
Locus tag: y0590
Name: rhaS
Funciton: L-rhamnose operon regulatory protein RhaS
rhaS -214 3.9 GAAAGTGAAACAGCTCACAGTT y0590
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