Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rnd gene

Properties
Regulog: Crp - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria/gamma
Built upon 2301 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Erwinia amylovora ATCC 49946
Position: -130
Score: 3.94955
Sequence: TTTAGTGATGCGCTTCGCAACC
Locus tag: EAM_1956
Name: fadD
Funciton: long-chain-fatty-acid--CoA ligase
Locus tag: EAM_1955
Name: rnd
Funciton: ribonuclease D
fadD-rnd -130 3.9 TTTAGTGATGCGCTTCGCAACC EAM_1956
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -132
Score: 3.80185
Sequence: ATTAGTGATCGTTCTCGCAACC
Position: -75
Score: 3.67064
Sequence: TAAAATAATGTTAATAACAATA
Locus tag: ECA2372
Name: fadD
Funciton: long-chain-fatty-acid--CoA ligase
Locus tag: ECA2371
Name: rnd
Funciton: ribonuclease D
fadD-rnd -132 3.8 ATTAGTGATCGTTCTCGCAACC ECA2372
-75 3.7 TAAAATAATGTTAATAACAATA
Escherichia coli str. K-12 substr. MG1655
Position: -131
Score: 3.73551
Sequence: AATAGTGACGCGCTTCGCAACC
Locus tag: b1805
Name: fadD
Funciton: long-chain-fatty-acid--CoA ligase
Locus tag: b1804
Name: rnd
Funciton: ribonuclease D
fadD-rnd -131 3.7 AATAGTGACGCGCTTCGCAACC b1805
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -97
Score: 3.73551
Sequence: AATAGTGACGCGCTTCGCAACC
Locus tag: KPN_02322
Name: fadD
Funciton: long-chain-fatty-acid--CoA ligase
Locus tag: KPN_02321
Name: rnd
Funciton: ribonuclease D
fadD-rnd -97 3.7 AATAGTGACGCGCTTCGCAACC KPN_02322
Photorhabdus luminescens subsp. laumondii TTO1
Position: -288
Score: 3.79365
Sequence: AAATGCTATCTTAAGCAAAAAA
Position: -137
Score: 4.00237
Sequence: ATTAGTGATGTGTATCTCAACC
Locus tag: plu2134
Name: fadD
Funciton: long-chain-fatty-acid--CoA ligase
Locus tag: plu2135
Name: rnd
Funciton: ribonuclease D
fadD-rnd -288 3.8 AAATGCTATCTTAAGCAAAAAA plu2134
-137 4 ATTAGTGATGTGTATCTCAACC
Proteus mirabilis HI4320
Position: -121
Score: 4.36769
Sequence: TTTAGTGATACACTTCGCATCT
Locus tag: PMI1166
Name: fadD
Funciton: long-chain-fatty-acid--CoA ligase
Locus tag: PMI1167
Name: rnd
Funciton: ribonuclease D
fadD-rnd -121 4.4 TTTAGTGATACACTTCGCATCT PMI1166
Salmonella typhimurium LT2
Position: -131
Score: 3.73551
Sequence: AATAGTGACGCGCTTCGCAACC
Locus tag: STM1818
Name: fadD
Funciton: long-chain-fatty-acid--CoA ligase
Locus tag: STM1817
Name: rnd
Funciton: ribonuclease D
fadD-rnd -131 3.7 AATAGTGACGCGCTTCGCAACC STM1818
Serratia proteamaculans 568
Position: -99
Score: 3.86902
Sequence: ATTAGTGACGTACATCGCAACC
Locus tag: Spro_2760
Name: fadD
Funciton: long-chain-fatty-acid--CoA ligase
Locus tag: Spro_2759
Name: rnd
Funciton: ribonuclease D
fadD-rnd -99 3.9 ATTAGTGACGTACATCGCAACC Spro_2760
Yersinia pestis KIM
Position: -73
Score: 3.68716
Sequence: TGTTGTGTTTGTTATCGAACTA
Locus tag: y2235
Name: rnd
Funciton: ribonuclease D
rnd -73 3.7 TGTTGTGTTTGTTATCGAACTA y2235
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