Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing deoD gene

Properties
Regulog: Crp - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria/gamma
Built upon 2301 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -134
Score: 4.19038
Sequence: TTATTTGAAGTGGATCTCGTTA
Position: -81
Score: 4.16695
Sequence: AACTGTGATGTATATCGAAGTG
Locus tag: CKO_03410
Name: deoC
Funciton: 2-deoxyribose-5-phosphate aldolase
Locus tag: CKO_03409
Name: deoA
Funciton: thymidine phosphorylase
Locus tag: CKO_03408
Name: deoB
Funciton: phosphopentomutase
Locus tag: CKO_03407
Name: deoD
Funciton: purine nucleoside phosphorylase
deoC-deoA-deoB-deoD -134 4.2 TTATTTGAAGTGGATCTCGTTA CKO_03410
-81 4.2 AACTGTGATGTATATCGAAGTG
Enterobacter sp. 638
Position: -151
Score: 4.59041
Sequence: AAATTTGAAGTGGATCTCATTA
Position: -98
Score: 3.70952
Sequence: AACTGTGATGAATGTCGAAGTG
Locus tag: Ent638_0541
Name: deoC
Funciton: 2-deoxyribose-5-phosphate aldolase
Locus tag: Ent638_0542
Name: deoA
Funciton: thymidine phosphorylase
Locus tag: Ent638_0543
Name: deoB
Funciton: phosphopentomutase
Locus tag: Ent638_0544
Name: deoD
Funciton: purine nucleoside phosphorylase
deoC-deoA-deoB-deoD -151 4.6 AAATTTGAAGTGGATCTCATTA Ent638_0541
-98 3.7 AACTGTGATGAATGTCGAAGTG
Erwinia amylovora ATCC 49946
Position: -233
Score: 4.6175
Sequence: TGATGTGATAATTCTAACATTA
Locus tag: EAM_0615
Name: deoC
Funciton: 2-deoxyribose-5-phosphate aldolase
Locus tag: EAM_0616
Name: deoA
Funciton: thymidine phosphorylase
Locus tag: EAM_0617
Name: deoB
Funciton: phosphopentomutase
Locus tag: EAM_0618
Name: deoD
Funciton: purine nucleoside phosphorylase
deoC-deoA-deoB-deoD -233 4.6 TGATGTGATAATTCTAACATTA EAM_0615
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -282
Score: 4.40706
Sequence: AAGTGTGAATGAATGCACAAAA
Locus tag: ECA0727
Name: deoC
Funciton: 2-deoxyribose-5-phosphate aldolase
Locus tag: ECA0728
Name: deoA
Funciton: thymidine phosphorylase
Locus tag: ECA0729
Name: deoB
Funciton: phosphopentomutase
Locus tag: ECA0730
Name: deoD
Funciton: purine nucleoside phosphorylase
deoC-deoA-deoB-deoD -282 4.4 AAGTGTGAATGAATGCACAAAA ECA0727
Escherichia coli str. K-12 substr. MG1655
Position: -149
Score: 4.6238
Sequence: TTATTTGAACCAGATCGCATTA
Position: -96
Score: 4.52458
Sequence: AATTGTGATGTGTATCGAAGTG
Locus tag: b4381
Name: deoC
Funciton: 2-deoxyribose-5-phosphate aldolase
Locus tag: b4382
Name: deoA
Funciton: thymidine phosphorylase
Locus tag: b4383
Name: deoB
Funciton: phosphopentomutase
Locus tag: b4384
Name: deoD
Funciton: purine nucleoside phosphorylase
deoC-deoA-deoB-deoD -149 4.6 TTATTTGAACCAGATCGCATTA b4381
-96 4.5 AATTGTGATGTGTATCGAAGTG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -158
Score: 5.24195
Sequence: ATTTGTGATTTTAATCACGTTA
Position: -105
Score: 3.70952
Sequence: AACTGTGATGAATGTCGAAGTG
Locus tag: KPN_04837
Name: deoC
Funciton: 2-deoxyribose-5-phosphate aldolase
Locus tag: KPN_04838
Name: deoA
Funciton: thymidine phosphorylase
Locus tag: KPN_04839
Name: deoB
Funciton: phosphopentomutase
Locus tag: KPN_04840
Name: deoD
Funciton: purine nucleoside phosphorylase
deoC-deoA-deoB-deoD -158 5.2 ATTTGTGATTTTAATCACGTTA KPN_04837
-105 3.7 AACTGTGATGAATGTCGAAGTG
Proteus mirabilis HI4320
Position: -267
Score: 4.43561
Sequence: ATATGTGAGTTACTTCGCAACT
Position: -135
Score: 5.57484
Sequence: TTTTGTGATTCTGATCACAATT
Position: -83
Score: 4.48713
Sequence: TATTGTGACAGAAAGCACATCT
Locus tag: PMI2416
Name: deoC
Funciton: 2-deoxyribose-5-phosphate aldolase
Locus tag: PMI2415
Name: deoA
Funciton: thymidine phosphorylase
Locus tag: PMI2414
Name: deoB
Funciton: phosphopentomutase
Locus tag: PMI2413
Name: deoD
Funciton: purine nucleoside phosphorylase
deoC-deoA-deoB-deoD -267 4.4 ATATGTGAGTTACTTCGCAACT PMI2416
-135 5.6 TTTTGTGATTCTGATCACAATT
-83 4.5 TATTGTGACAGAAAGCACATCT
Serratia proteamaculans 568
Position: -262
Score: 4.58868
Sequence: ATTTGTGAACGATATCGCGTTA
Position: -240
Score: 5.52813
Sequence: TTTTGTGATGGTCTTCACATAT
Position: -188
Score: 3.84023
Sequence: TAGTGTGACTGTGAACGCGAAT
Locus tag: Spro_0660
Name: deoC
Funciton: 2-deoxyribose-5-phosphate aldolase
Locus tag: Spro_0661
Name: deoA
Funciton: thymidine phosphorylase
Locus tag: Spro_0662
Name: deoB
Funciton: phosphopentomutase
Locus tag: Spro_0663
Name: deoD
Funciton: purine nucleoside phosphorylase
deoC-deoA-deoB-deoD -262 4.6 ATTTGTGAACGATATCGCGTTA Spro_0660
-240 5.5 TTTTGTGATGGTCTTCACATAT
-188 3.8 TAGTGTGACTGTGAACGCGAAT
Yersinia pestis KIM
Position: -169
Score: 3.67378
Sequence: TGCGGTGAGATGGATCTCAATT
Locus tag: y3743
Name: deoC
Funciton: 2-deoxyribose-5-phosphate aldolase
Locus tag: y3742
Name: deoA
Funciton: thymidine phosphorylase
Locus tag: y3741
Name: deoB
Funciton: phosphopentomutase
Locus tag: y3740
Name: deoD
Funciton: purine nucleoside phosphorylase
deoC-deoA-deoB-deoD -169 3.7 TGCGGTGAGATGGATCTCAATT y3743
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