Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing cspD gene

Properties
Regulog: Crp - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria/gamma
Built upon 2301 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -210
Score: 3.86863
Sequence: ATCCGCGACATCTGTCACATTA
Position: -181
Score: 4.00922
Sequence: TAGCGTTAACTGCTTCAAATTT
Locus tag: CKO_02200
Name: cspD
Funciton: cold shock-like protein
cspD -210 3.9 ATCCGCGACATCTGTCACATTA CKO_02200
-181 4 TAGCGTTAACTGCTTCAAATTT
Enterobacter sp. 638
Position: -209
Score: 3.78268
Sequence: ATCCGCGATATCTGTCACATTC
Position: -180
Score: 3.92677
Sequence: TAGCGTTAACTGCTTCAAAAAT
Locus tag: Ent638_1397
Name: cspD
Funciton: cold shock-like protein
cspD -209 3.8 ATCCGCGATATCTGTCACATTC Ent638_1397
-180 3.9 TAGCGTTAACTGCTTCAAAAAT
Escherichia coli str. K-12 substr. MG1655
Position: -180
Score: 4.00922
Sequence: TAGCGTTAACTGCTTCAAATTT
Locus tag: b0880
Name: cspD
Funciton: cold shock-like protein
cspD -180 4 TAGCGTTAACTGCTTCAAATTT b0880
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -270
Score: 4.15249
Sequence: AGAGGTTATGCTCATCACAAAT
Position: -180
Score: 4.00922
Sequence: TAGCGTTAACTGCTTCAAATTT
Locus tag: KPN_00913
Name: cspD
Funciton: cold shock-like protein
cspD -270 4.2 AGAGGTTATGCTCATCACAAAT KPN_00913
-180 4 TAGCGTTAACTGCTTCAAATTT
Photorhabdus luminescens subsp. laumondii TTO1
Position: -194
Score: 4.55121
Sequence: TATCGTTATCTATATCAAACTT
Locus tag: plu1592
Name: cspD
Funciton: cold shock-like protein
cspD -194 4.6 TATCGTTATCTATATCAAACTT plu1592
Proteus mirabilis HI4320
Position: -163
Score: 3.84753
Sequence: AAGCGTTAGCTACATCAAAGTT
Locus tag: PMI0688
Name: cspD
Funciton: cold shock-like protein
cspD -163 3.8 AAGCGTTAGCTACATCAAAGTT PMI0688
Salmonella typhimurium LT2
Position: -181
Score: 4.00922
Sequence: TAGCGTTAACTGCTTCAAATTT
Locus tag: STM0943
Name: cspD
Funciton: cold shock-like protein
cspD -181 4 TAGCGTTAACTGCTTCAAATTT STM0943
Serratia proteamaculans 568
Position: -205
Score: 3.96164
Sequence: TAGCGTTACCTGCTTCAAACTT
Position: -49
Score: 3.85705
Sequence: TTCAGTTATTCATCTCACCTAA
Locus tag: Spro_1672
Name: cspD
Funciton: cold shock-like protein
cspD -205 4 TAGCGTTACCTGCTTCAAACTT Spro_1672
-49 3.9 TTCAGTTATTCATCTCACCTAA
© 2009-2020 RegPrecise