Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing cpdB gene

Properties
Regulog: Crp - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria/gamma
Built upon 2301 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -25
Score: 4.19973
Sequence: TTTTGTGTTTCAGATCTAAAAA
Locus tag: CKO_03616
Name: cpdB
Funciton: 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor
cpdB -25 4.2 TTTTGTGTTTCAGATCTAAAAA CKO_03616
Enterobacter sp. 638
Position: -34
Score: 4.01012
Sequence: TTTTGTGGCTTGGATCGAAAAA
Locus tag: Ent638_0392
Name: cpdB
Funciton: 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor
cpdB -34 4 TTTTGTGGCTTGGATCGAAAAA Ent638_0392
Escherichia coli str. K-12 substr. MG1655
Position: -118
Score: 3.79221
Sequence: AACTGTGATAGTGTCATCATTT
Position: -85
Score: 3.79357
Sequence: AATTGTGGCATTCTTCACTGTT
Locus tag: b4213
Name: cpdB
Funciton: 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor
cpdB -118 3.8 AACTGTGATAGTGTCATCATTT b4213
-85 3.8 AATTGTGGCATTCTTCACTGTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -156
Score: 3.75653
Sequence: TTGTTTTATTTATATCGCATCA
Position: -87
Score: 3.68303
Sequence: TTTTCTGGCAAGATTCACATTT
Position: -35
Score: 4.15863
Sequence: TTCTGTGCTATCGCTCATAAAA
Locus tag: KPN_04607
Name: cpdB
Funciton: 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor
cpdB -156 3.8 TTGTTTTATTTATATCGCATCA KPN_04607
-87 3.7 TTTTCTGGCAAGATTCACATTT
-35 4.2 TTCTGTGCTATCGCTCATAAAA
Salmonella typhimurium LT2
Position: -145
Score: 3.72732
Sequence: TTCTGTGAACACTCGCAAAAAA
Locus tag: STM4403
Name: cpdB
Funciton: 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor
cpdB -145 3.7 TTCTGTGAACACTCGCAAAAAA STM4403
Serratia proteamaculans 568
Position: -95
Score: 3.82334
Sequence: TTTTCTGCCACACTTCACAGTT
Locus tag: Spro_0453
Name: cpdB
Funciton: 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor
cpdB -95 3.8 TTTTCTGCCACACTTCACAGTT Spro_0453
Yersinia pestis KIM
Position: -148
Score: 3.58579
Sequence: AACTGTGAGCGTCTACGCGTTA
Position: -116
Score: 3.77733
Sequence: TTTTCTGCCAAACTTCACACTT
Position: -63
Score: 4.43882
Sequence: TTTTGCGATACATATCGAATAT
Locus tag: y0653
Name: cpdB
Funciton: 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor
cpdB -148 3.6 AACTGTGAGCGTCTACGCGTTA y0653
-116 3.8 TTTTCTGCCAAACTTCACACTT
-63 4.4 TTTTGCGATACATATCGAATAT
© 2009-2020 RegPrecise