Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing alaS gene

Properties
Regulator type: RNA regulatory element
Name: T-box
RFAM: RF00230
Regulation mode:
Biological process: Amino acid metabolism
Effector: Ala-tRNA
Phylum: Firmicutes
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Lactobacillus acidophilus NCFM
Position: -213
Score: 55.33
Sequence: TTCAGCTTAAGATAT...
Locus tag: LBA0417
Name: alaS
Funciton: Alanyl-tRNA synthetase (EC 6.1.1.7)
alaS -213 55.3 TTCAGCTTAAGATAT... LBA0417
Lactobacillus brevis ATCC 367
Position: -237
Score: 54.88
Sequence: TATTTCAATAATATA...
Locus tag: LVIS_1223
Name: alaS
Funciton: Alanyl-tRNA synthetase (EC 6.1.1.7)
alaS -237 54.9 TATTTCAATAATATA... LVIS_1223
Lactobacillus casei ATCC 334
Position: -377
Score: 32.53
Sequence: GAAAAGCTATAATGA...
Locus tag: LSEI_0784
Name: alaS
Funciton: Alanyl-tRNA synthetase (EC 6.1.1.7)
alaS -377 32.5 GAAAAGCTATAATGA... LSEI_0784
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
Position: -213
Score: 49.44
Sequence: AGAGACGCTTAAGAT...
Locus tag: LBUL_1486
Name: alaS
Funciton: Alanyl-tRNA synthetase (EC 6.1.1.7)
alaS -213 49.4 AGAGACGCTTAAGAT... LBUL_1486
Lactobacillus fermentum IFO 3956
Position: -224
Score: 44.78
Sequence: ACACATCTGGGACAT...
Locus tag: LAF_0521
Name: alaS
Funciton: Alanyl-tRNA synthetase (EC 6.1.1.7)
alaS -224 44.8 ACACATCTGGGACAT... LAF_0521
Lactobacillus helveticus DPC 4571
Position: -209
Score: 56.23
Sequence: TTCAGCTTAAGATAT...
Locus tag: lhv_0438
Name: alaS
Funciton: Alanyl-tRNA synthetase (EC 6.1.1.7)
alaS -209 56.2 TTCAGCTTAAGATAT... lhv_0438
Lactobacillus johnsonii NCC 533
Position: -211
Score: 62.14
Sequence: GCACGTTTAGGACAT...
Locus tag: LJ0474
Name: alaS
Funciton: Alanyl-tRNA synthetase (EC 6.1.1.7)
alaS -211 62.1 GCACGTTTAGGACAT... LJ0474
Lactobacillus plantarum WCFS1
Position: -262
Score: 60.16
Sequence: TTTCTATACTTTGCA...
Locus tag: lp_2277
Name: alaS
Funciton: Alanyl-tRNA synthetase (EC 6.1.1.7)
alaS -262 60.2 TTTCTATACTTTGCA... lp_2277
Lactobacillus reuteri JCM 1112
Position: -233
Score: 43.14
Sequence: AATATGACACGTCTG...
Locus tag: LAR_0519
Name: alaS
Funciton: Alanyl-tRNA synthetase (EC 6.1.1.7)
alaS -233 43.1 AATATGACACGTCTG... LAR_0519
Lactobacillus rhamnosus GG
Position: -138
Score: 36.94
Sequence: GAAAAGCTATAATTG...
Locus tag: LGG_00766
Name: null
Funciton: predicted ORF
Locus tag: LGG_00767
Name: alaS
Funciton: Alanyl-tRNA synthetase (EC 6.1.1.7)
LGG_00766-alaS -138 36.9 GAAAAGCTATAATTG... LGG_00766
Lactobacillus sakei subsp. sakei 23K
Position: -190
Score: 32.42
Sequence: TCATTAGAACGACAG...
Locus tag: LSA0387
Name: alaS
Funciton: Alanyl-tRNA synthetase (EC 6.1.1.7)
alaS -190 32.4 TCATTAGAACGACAG... LSA0387
Lactobacillus salivarius subsp. salivarius UCC118
Position: -242
Score: 64.92
Sequence: TACTTTGACTTGAAT...
Locus tag: LSL_1111
Name: alaS
Funciton: Alanyl-tRNA synthetase (EC 6.1.1.7)
alaS -242 64.9 TACTTTGACTTGAAT... LSL_1111
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
Position: -249
Score: 52.04
Sequence: TAATGATTAGGAATT...
Locus tag: LEUM_0556
Name: alaS
Funciton: Alanyl-tRNA synthetase (EC 6.1.1.7)
alaS -249 52 TAATGATTAGGAATT... LEUM_0556
Oenococcus oeni PSU-1
Position: -195
Score: 61.54
Sequence: GAATAGAAAACGGAT...
Locus tag: OEOE_1167
Name: alaS
Funciton: Alanyl-tRNA synthetase (EC 6.1.1.7)
alaS -195 61.5 GAATAGAAAACGGAT... OEOE_1167
Pediococcus pentosaceus ATCC 25745
Position: -228
Score: 62.76
Sequence: AAAATCATTTGAGAT...
Locus tag: PEPE_1263
Name: alaS
Funciton: Alanyl-tRNA synthetase (EC 6.1.1.7)
alaS -228 62.8 AAAATCATTTGAGAT... PEPE_1263
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