Orthologous regulated operons containing dapL gene
| Regulator type: | RNA regulatory element |
| Name: | Lysine |
| RFAM: | RF00168 |
| Regulation mode: | |
| Biological process: | Lysine biosynthesis |
| Effector: | Lysine |
| Phylum: | Firmicutes |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Lactobacillus acidophilus NCFM | ||||
|
Position: -260
Score: 112.02 Sequence: TAAATCATAGAGGCG...
Locus tag: LBA0851
Name: lysA Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20)
Locus tag: LBA0852
Name: dapD Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: LBA0853
Name: dapL Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)
Locus tag: LBA0854
Name: dapA Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: LBA0855
Name: dapB Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: LBA0856
Name: patA Funciton: N-acetyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.-)
Locus tag: LBA0857
Name: asd Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) |
||||
| lysA-dapD-dapL-dapA-dapB-patA-asd | -260 | 112 | TAAATCATAGAGGCG... | LBA0851 |
| Lactobacillus casei ATCC 334 | ||||
|
Position: -278
Score: 98.35 Sequence: ACAAACAGATAGAGG...
Locus tag: LSEI_0098
Name: lysA Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20)
Locus tag: LSEI_0097
Name: dapD Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: LSEI_0096
Name: dapL Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)
Locus tag: LSEI_0095
Name: dapA Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: LSEI_0094
Name: dapB Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26) |
||||
| lysA-dapD-dapL-dapA-dapB | -278 | 98.3 | ACAAACAGATAGAGG... | LSEI_0098 |
| Lactobacillus fermentum IFO 3956 | ||||
|
Position: -270
Score: 80.68 Sequence: TAAATTGAAGAGGCG...
Locus tag: LAF_0854
Name: lysA Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20)
Locus tag: LAF_0855
Name: dapD Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: LAF_0856
Name: dapL Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)
Locus tag: LAF_0857
Name: dapA Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: LAF_0858
Name: dapB Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: LAF_0859
Name: patA Funciton: N-acetyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.-)
Locus tag: LAF_0860
Name: asd Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) |
||||
| lysA-dapD-dapL-dapA-dapB-patA-asd | -270 | 80.7 | TAAATTGAAGAGGCG... | LAF_0854 |
| Lactobacillus helveticus DPC 4571 | ||||
|
Position: -266
Score: 103.28 Sequence: AAATCGAAGAGGCGC...
Locus tag: lhv_0905
Name: lysA Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20)
Locus tag: lhv_0906
Name: dapD Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: lhv_0907
Name: dapL Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)
Locus tag: lhv_0908
Name: dapA Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: lhv_0909
Name: dapB Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: lhv_0910
Name: patA Funciton: N-acetyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.-)
Locus tag: lhv_0911
Name: asd Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) |
||||
| lysA-dapD-dapL-dapA-dapB-patA-asd | -266 | 103.3 | AAATCGAAGAGGCGC... | lhv_0905 |
| Lactobacillus reuteri JCM 1112 | ||||
|
Position: -272
Score: 95.35 Sequence: TAAATCGAAGAGGCG...
Locus tag: LAR_0592
Name: lysA Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20)
Locus tag: LAR_0593
Name: dapD Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: LAR_0594
Name: dapL Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)
Locus tag: LAR_0595
Name: dapA Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: LAR_0596
Name: dapB Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: LAR_0597
Name: patA Funciton: N-acetyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.-)
Locus tag: LAR_0598
Name: asd Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) |
||||
| lysA-dapD-dapL-dapA-dapB-patA-asd | -272 | 95.3 | TAAATCGAAGAGGCG... | LAR_0592 |
| Lactobacillus rhamnosus GG | ||||
|
Position: -281
Score: 107.48 Sequence: TTAAACAGATAGAGG...
Locus tag: LGG_00112
Name: lysA Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20)
Locus tag: LGG_00111
Name: dapD Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: LGG_00110
Name: dapL Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) |
||||
| lysA-dapD-dapL | -281 | 107.5 | TTAAACAGATAGAGG... | LGG_00112 |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | ||||
|
Position: -251
Score: 78.32 Sequence: TTTCACATAGAGGTC...
Locus tag: LEUM_0667
Name: lysA Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20)
Locus tag: LEUM_0668
Name: dapD Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: LEUM_0669
Name: dapL Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)
Locus tag: LEUM_0670
Name: dapA Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: LEUM_0671
Name: dapB Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26) |
||||
| lysA-dapD-dapL-dapA-dapB | -251 | 78.3 | TTTCACATAGAGGTC... | LEUM_0667 |
| Oenococcus oeni PSU-1 | ||||
|
Position: -226
Score: 82.53 Sequence: TCCGTAATAGAGGTG...
Locus tag: OEOE_0771
Name: lysA Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20)
Locus tag: OEOE_0772
Name: dapD Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: OEOE_0773
Name: dapL Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)
Locus tag: OEOE_0774
Name: dapA Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: OEOE_0775
Name: dapB Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: OEOE_0776
Name: asd Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: OEOE_0777
Name: patA Funciton: N-acetyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.-) |
||||
| lysA-dapD-dapL-dapA-dapB-asd-patA | -226 | 82.5 | TCCGTAATAGAGGTG... | OEOE_0771 |