Orthologous regulated operons containing thiD gene
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Phylum: | Firmicutes |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Lactobacillus brevis ATCC 367 | ||||
|
Position: -334
Score: 64.26 Sequence: ACCAAAACACTAGGG...
Locus tag: LVIS_2099
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: LVIS_2098
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: LVIS_2097
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
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| thiM-thiD-thiE | -334 | 64.3 | ACCAAAACACTAGGG... | LVIS_2099 |
| Lactobacillus casei ATCC 334 | ||||
|
Position: -245
Score: 68.22 Sequence: AGAAACATTTGGGGT...
Locus tag: LSEI_0294
Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: LSEI_0295
Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: LSEI_0296
Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: LSEI_0297
Name: tenA Funciton: Thiaminase II (EC 3.5.99.2)
Locus tag: LSEI_0298
Name: thiW Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter
Locus tag: LSEI_0299
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: LSEI_0300
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: LSEI_0301
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
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| ykoE-ykoD-ykoC-tenA-thiW-thiM-thiE-thiD | -245 | 68.2 | AGAAACATTTGGGGT... | LSEI_0294 |
| Lactobacillus fermentum IFO 3956 | ||||
|
Position: -282
Score: 61.95 Sequence: TAATAGTTGCTAGGG...
Locus tag: LAF_0803
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: LAF_0802
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: LAF_0801
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
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| thiM-thiD-thiE | -282 | 62 | TAATAGTTGCTAGGG... | LAF_0803 |
| Lactobacillus plantarum WCFS1 | ||||
|
Position: -183
Score: 67.44 Sequence: TTAAACACTAGGGGT...
Locus tag: lp_0113
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: lp_0114
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: lp_0115
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: lp_0116
Name: cytX Funciton: Predicted hydroxymethylpyrimidine transporter CytX |
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| thiM-thiD-thiE-cytX | -183 | 67.4 | TTAAACACTAGGGGT... | lp_0113 |
| Lactobacillus reuteri JCM 1112 | ||||
|
Position: -162
Score: 54.26 Sequence: TATTGCATTAGGGGT...
Locus tag: LAR_0968
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: LAR_0969
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: LAR_0970
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
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| thiM-thiD-thiE | -162 | 54.3 | TATTGCATTAGGGGT... | LAR_0968 |
| Lactobacillus rhamnosus GG | ||||
|
Position: -289
Score: 71.02 Sequence: AGAAACATTTGGGGT...
Locus tag: LGG_00363
Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: LGG_00364
Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: LGG_00365
Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: LGG_00366
Name: tenA Funciton: Thiaminase II (EC 3.5.99.2)
Locus tag: LGG_00367
Name: thiW Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter
Locus tag: LGG_00368
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: LGG_00369
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: LGG_00370
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
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| ykoE-ykoD-ykoC-tenA-thiW-thiM-thiE-thiD | -289 | 71 | AGAAACATTTGGGGT... | LGG_00363 |
| Lactobacillus sakei subsp. sakei 23K | ||||
|
Position: -178
Score: 69.43 Sequence: CGCTTTGCACTAGGG...
Locus tag: LSA0059
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: LSA0058
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: LSA0057
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: LSA0055
Name: cytX Funciton: Predicted hydroxymethylpyrimidine transporter CytX |
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| thiM-thiD-thiE-cytX | -178 | 69.4 | CGCTTTGCACTAGGG... | LSA0059 |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | ||||
|
Position: -234
Score: 60.02 Sequence: ATAAATATCTGGGGT...
Locus tag: LEUM_0485
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: LEUM_0486
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: LEUM_0487
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
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| thiM-thiD-thiE | -234 | 60 | ATAAATATCTGGGGT... | LEUM_0485 |
| Pediococcus pentosaceus ATCC 25745 | ||||
|
Position: -185
Score: 66.6 Sequence: ATCTGCACTAGGGGT...
Locus tag: PEPE_0558
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: PEPE_0559
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: PEPE_0560
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: PEPE_0561
Name: tenA Funciton: Thiaminase II (EC 3.5.99.2) |
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| thiM-thiD-thiE-tenA | -185 | 66.6 | ATCTGCACTAGGGGT... | PEPE_0558 |