Orthologous regulated operons containing thiW gene

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Phylum:	Firmicutes

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Lactobacillus casei ATCC 334
Position: -245 Score: 68.22 Sequence: AGAAACATTTGGGGT... Locus tag: LSEI_0294 Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: LSEI_0295 Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: LSEI_0296 Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: LSEI_0297 Name: tenA Funciton: Thiaminase II (EC 3.5.99.2) Locus tag: LSEI_0298 Name: thiW Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter Locus tag: LSEI_0299 Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50) Locus tag: LSEI_0300 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Locus tag: LSEI_0301 Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
ykoE-ykoD-ykoC-tenA-thiW-thiM-thiE-thiD	-245	68.2	AGAAACATTTGGGGT...	LSEI_0294
Lactobacillus fermentum IFO 3956
Position: -300 Score: 74.27 Sequence: CAGAATCTGTCTGGG... Locus tag: LAF_1533 Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: LAF_1532 Name: thiW Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter
ykoE-thiW	-300	74.3	CAGAATCTGTCTGGG...	LAF_1533
Lactobacillus rhamnosus GG
Position: -289 Score: 71.02 Sequence: AGAAACATTTGGGGT... Locus tag: LGG_00363 Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: LGG_00364 Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: LGG_00365 Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: LGG_00366 Name: tenA Funciton: Thiaminase II (EC 3.5.99.2) Locus tag: LGG_00367 Name: thiW Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter Locus tag: LGG_00368 Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50) Locus tag: LGG_00369 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Locus tag: LGG_00370 Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
ykoE-ykoD-ykoC-tenA-thiW-thiM-thiE-thiD	-289	71	AGAAACATTTGGGGT...	LGG_00363
Lactobacillus sakei subsp. sakei 23K
Position: -203 Score: 60.89 Sequence: AATAACGCATCTGGG... Locus tag: LSA1095 Name: tenA Funciton: Thiaminase II (EC 3.5.99.2) Locus tag: LSA1094 Name: thiW Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter
tenA-thiW	-203	60.9	AATAACGCATCTGGG...	LSA1095
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
Position: -349 Score: 65.35 Sequence: GCTTGTGCTAGGGGC... Position: -177 Score: 79.87 Sequence: ATAATCACTAGGGGC... Locus tag: LEUM_0933 Name: null Funciton: Xanthine/uracil permease Locus tag: LEUM_0934 Name: null Funciton: Acyl-CoA synthetase (AMP-forming)/AMP-acid ligse II Locus tag: LEUM_0935 Name: null Funciton: Acyl-CoA reductase (LuxC) Locus tag: LEUM_0936 Name: null Funciton: 3-oxoacyl-acyl carrier protein reductase Locus tag: LEUM_0937 Name: thiW Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter Locus tag: LEUM_0938 Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
LEUM_0933-LEUM_0934-LEUM_0935-LEUM_0936-thiW-thiM	-349	65.3	GCTTGTGCTAGGGGC...	LEUM_0933
	-177	79.9	ATAATCACTAGGGGC...