Orthologous regulated operons containing rpsO gene
Regulator type: | RNA regulatory element |
Name: | S15 |
RFAM: | RF00114 |
Regulation mode: | |
Biological process: | Ribosome biogenesis |
Effector: | |
Phylum: | Firmicutes |
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Operon | Position | Score | Sequence | Locus Tag of the First Gene |
---|---|---|---|---|
Lactobacillus brevis ATCC 367 | ||||
Position: -53
Score: 13.85 Sequence: CACCGCCGGCTTACT...
Locus tag: LVIS_1392
Name: rpsO Funciton: SSU ribosomal protein S15p (S13e) |
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rpsO | -53 | 13.9 | CACCGCCGGCTTACT... | LVIS_1392 |
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | ||||
Position: -82
Score: 14.07 Sequence: GTGAACCCCGGACGT...
Locus tag: LBUL_0706
Name: rpsO Funciton: SSU ribosomal protein S15p (S13e) |
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rpsO | -82 | 14.1 | GTGAACCCCGGACGT... | LBUL_0706 |
Lactobacillus johnsonii NCC 533 | ||||
Position: -73
Score: 23.24 Sequence: ATTGACGCTGTTTTC...
Locus tag: LJ1006
Name: rpsO Funciton: SSU ribosomal protein S15p (S13e) |
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rpsO | -73 | 23.2 | ATTGACGCTGTTTTC... | LJ1006 |
Lactobacillus reuteri JCM 1112 | ||||
Position: -75
Score: 15.92 Sequence: TTCTCAGTTTAACGA...
Locus tag: LAR_0625
Name: rpsO Funciton: SSU ribosomal protein S15p (S13e) |
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rpsO | -75 | 15.9 | TTCTCAGTTTAACGA... | LAR_0625 |
Lactobacillus sakei subsp. sakei 23K | ||||
Position: -70
Score: 18.73 Sequence: TCTGTTTAGCGACGT...
Locus tag: LSA1066
Name: rpsO Funciton: SSU ribosomal protein S15p (S13e) |
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rpsO | -70 | 18.7 | TCTGTTTAGCGACGT... | LSA1066 |
Lactobacillus salivarius subsp. salivarius UCC118 | ||||
Position: -75
Score: 14.55 Sequence: CTTTTTACTGAGTTT...
Locus tag: LSL_0638
Name: rpsO Funciton: SSU ribosomal protein S15p (S13e) |
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rpsO | -75 | 14.6 | CTTTTTACTGAGTTT... | LSL_0638 |
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | ||||
Position: -65
Score: 17.04 Sequence: TTGTTGAGCGGCTCA...
Locus tag: LEUM_1582
Name: rpsO Funciton: SSU ribosomal protein S15p (S13e) |
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rpsO | -65 | 17 | TTGTTGAGCGGCTCA... | LEUM_1582 |
Oenococcus oeni PSU-1 | ||||
Position: -62
Score: 22.83 Sequence: CTTTTCGCGAACCTA...
Locus tag: OEOE_1283
Name: rpsO Funciton: SSU ribosomal protein S15p (S13e) |
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rpsO | -62 | 22.8 | CTTTTCGCGAACCTA... | OEOE_1283 |
Pediococcus pentosaceus ATCC 25745 | ||||
Position: -54
Score: 25.61 Sequence: ATCTGCCGACGATTT...
Locus tag: PEPE_1146
Name: rpsO Funciton: SSU ribosomal protein S15p (S13e) |
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rpsO | -54 | 25.6 | ATCTGCCGACGATTT... | PEPE_1146 |